miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37669_nvi-mir-317:mirbase
Length = 90
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 ctcggagaacagggagccactctgcgttcactcggtaagtaaagaagcgggtgaacacag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 ctcggagaacagggagccactctgcgttcactcggtaggtaaagaagcgggtgaacacag 63
Query: 61 ctggtggtatctcagttttctgagggc 87
|||||||||||||||||||||||||||
Sbjct: 64 ctggtggtatctcagttttctgagggc 90
>35394_ame-mir-317:mirbase
Length = 90
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 ctcggagaacagggagccactctgcgttcactcggtaagtaaagaagcgggtgaacacag 60
|||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 4 ctcggagaacagggagccactctgcgttcactcggtgggtaatgaagcgggtgaacacag 63
Query: 61 ctggtggtatctcagttttctgagggc 87
|||||||||||||||||||||||||||
Sbjct: 64 ctggtggtatctcagttttctgagggc 90
>37801_tca-mir-317:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagttt 78
||||||||||||||||||||||||||||
Sbjct: 45 gtgaacacagctggtggtatctcagttt 72
>37802_tca-mir-317:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagttt 78
||||||||||||||||||||||||||||
Sbjct: 45 gtgaacacagctggtggtatctcagttt 72
>35032_dpu-mir-317:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 ggtgaacacagctggtggtatctcagt 76
|||||||||||||||||||||||||||
Sbjct: 59 ggtgaacacagctggtggtatctcagt 85
>35567_bmo-mir-317:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagtt 77
|||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagtt 80
>35227_aae-mir-317-1:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagt 76
||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>35228_aae-mir-317-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagt 76
||||||||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatctcagt 77
>36047_cqu-mir-317:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagt 76
||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>38776_cte-mir-317:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctc 73
|||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatctc 82
>38886_lgi-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatct 72
||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatct 81
>34987_isc-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagt 76
|||||||||||||||||||| |||||
Sbjct: 60 gtgaacacagctggtggtatatcagt 85
>35087_api-mir-317:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatct 72
||||||||||||||||||||||
Sbjct: 56 gtgaacacagctggtggtatct 77
>35315_aga-mir-317:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatctcagt 76
||||||||| ||||||||||||||||
Sbjct: 55 gtgaacacatctggtggtatctcagt 80
>36146_dan-mir-317:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74
>36228_der-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>36311_dgr-mir-317:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>36471_dme-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>36472_dme-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>36817_dmo-mir-317:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatc 72
>36892_dpe-mir-317-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74
>36893_dpe-mir-317-2:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74
>36976_dps-mir-317:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74
>37184_dse-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>37260_dsi-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
>37396_dvi-mir-317:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatc 72
>37473_dwi-mir-317:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 53 gtgaacacagctggtggtatc 73
>37555_dya-mir-317:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 gtgaacacagctggtggtatc 71
|||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75
