miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37573_ngi-mir-14:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 9 tcgctcggtcagtgggggtgagaaactggcttggctatgtactccccattgtggacagtc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgctcggtcagtgggggtgagaaactggcttggctatgtactccccattgtggacagtc 60
Query: 69 agtctttttctctctcctattggc 92
||||||||||||||||||||||||
Sbjct: 61 agtctttttctctctcctattggc 84
>35354_ame-mir-14:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 9 tcgctcggtcagtgggggtgagaaactggcttggct 44
||||| ||||||||||||||||||||||||||||||
Sbjct: 12 tcgctaggtcagtgggggtgagaaactggcttggct 47
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 62 agtcagtctttttctctctcctat 85
>35181_aae-mir-14:mirbase
Length = 173
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctattgg 91
|||||||||||||||||||||||||||
Sbjct: 93 agtcagtctttttctctctcctattgg 119
>36012_cqu-mir-14:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctattgg 91
|||||||||||||||||||||||||||
Sbjct: 55 agtcagtctttttctctctcctattgg 81
>37715_tca-mir-14:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 acagtcagtctttttctctctcctatt 89
|||||||||||||||||||||||||||
Sbjct: 49 acagtcagtctttttctctctcctatt 75
>37716_tca-mir-14:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 acagtcagtctttttctctctcctatt 89
|||||||||||||||||||||||||||
Sbjct: 49 acagtcagtctttttctctctcctatt 75
>35052_api-mir-14:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctatt 89
|||||||||||||||||||||||||
Sbjct: 63 agtcagtctttttctctctcctatt 87
>35282_aga-mir-14:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 56 agtcagtctttttctctctcctat 79
>35528_bmo-mir-14:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 46 agtcagtctttttctctctcctat 69
>36097_dan-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36175_der-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36263_dgr-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36365_dme-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36366_dme-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36773_dmo-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36846_dpe-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>36922_dps-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>37135_dse-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>37211_dsi-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>37349_dvi-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>37426_dwi-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
>37503_dya-mir-14:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 agtcagtctttttctctctcctat 88
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
