miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37590_ngi-mir-283:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 15 gtagtcaaatatcagctggtaattctgggatacttattatgcagcccaggattcttgctg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagtcaaatatcagctggtaattctgggatacttattatgcagcccaggattcttgctg 60
Query: 75 gtatccggttacgaactgg 93
|||||||||||||||||||
Sbjct: 61 gtatccggttacgaactgg 79
>35388_ame-mir-283:mirbase
Length = 100
Score = 79.8 bits (40), Expect = 4e-16
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 15 gtagtcaaatatcagctggtaattctgggatacttattatgcagcccaggattcttgctg 74
||||||||||||||||||||||||||||||| | | || | ||||||||||||||||
Sbjct: 15 gtagtcaaatatcagctggtaattctgggattttgacaat--aacccaggattcttgctg 72
Query: 75 gtatccggttacgaactgg 93
|||||||| ||||||||||
Sbjct: 73 gtatccggctacgaactgg 91
>36126_dan-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>36204_der-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>36293_dgr-mir-283:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>36430_dme-mir-283:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 21 aaatatcagctggtaattctggga 44
>36431_dme-mir-283:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 21 aaatatcagctggtaattctggga 44
>36801_dmo-mir-283:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>36878_dpe-mir-283:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>36958_dps-mir-283:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 19 aaatatcagctggtaattctggga 42
>37164_dse-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>37240_dsi-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>37378_dvi-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>37457_dwi-mir-283:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>37533_dya-mir-283:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 16 aaatatcagctggtaattctggga 39
>35559_bmo-mir-283:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 15 aaatatcagctggtaattctggg 37
>37785_tca-mir-283:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 11 aaatatcagctggtaattctggg 33
>37786_tca-mir-283:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 11 aaatatcagctggtaattctggg 33
>35213_aae-mir-283:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctggg 43
||||||||||||||||||||||
Sbjct: 17 aatatcagctggtaattctggg 38
>36039_cqu-mir-283:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctggg 43
||||||||||||||||||||||
Sbjct: 24 aatatcagctggtaattctggg 45
>38764_cte-mir-216b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctgggata 46
|||||||||||||||||||| ||||
Sbjct: 9 aatatcagctggtaattctgagata 33
>35027_dpu-mir-283:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 caaatatcagctggtaattctggg 43
||||||||||| ||||||||||||
Sbjct: 24 caaatatcagcaggtaattctggg 47
>35307_aga-mir-283:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattct 40
||||||||||||||||||||
Sbjct: 15 aaatatcagctggtaattct 34