miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37593_ngi-mir-375:mirbase
Length = 70
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 20 tggtccatcgatcccaacgatcaataaactgtgttattaaacaagtttgttcgttcggct 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtccatcgatcccaacgatcaataaactgtgttattaaacaagtttgttcgttcggct 60
Query: 80 cgagttat 87
||||||||
Sbjct: 61 cgagttat 68
>35396_ame-mir-375:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 aagtttgttcgttcggctcgagttat 87
||||||||||||||||||||||||||
Sbjct: 60 aagtttgttcgttcggctcgagttat 85
>34988_isc-mir-375:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttgttcgttcggctcgagtta 86
||||||||||||||||||||||
Sbjct: 61 tttgttcgttcggctcgagtta 82
>35229_aae-mir-375:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 aagtttgttcgttcggctcgagttat 87
||||||||||||| ||||||||||||
Sbjct: 75 aagtttgttcgtttggctcgagttat 100
>35316_aga-mir-375-1:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 agtttgttcgttcggctcgagttat 87
|||||||||||| ||||||||||||
Sbjct: 65 agtttgttcgtttggctcgagttat 89
>35317_aga-mir-375-2:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 agtttgttcgttcggctcgagttat 87
|||||||||||| ||||||||||||
Sbjct: 65 agtttgttcgtttggctcgagttat 89
>36048_cqu-mir-375:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 agtttgttcgttcggctcgagttat 87
|||||||||||| ||||||||||||
Sbjct: 67 agtttgttcgtttggctcgagttat 91
