miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38499_crm-mir-35f:mirbase
Length = 114
Score = 117 bits (59), Expect = 2e-27
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 1 attgcacttgacgacgggaaccgtgctgatgttgacctcggtgataggactgaaccgtta 60
||||||||||||||||||||| ||||||||| ||||| ||| |||||||| ||| || |
Sbjct: 1 attgcacttgacgacgggaacagtgctgatgccgaccttggtaataggactaaactgtga 60
Query: 61 caagctatcaccgggtgaacattggtactggtcccttagtcat 103
||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 61 caagctatcaccgggtgggcattggttctggtcccttagtcat 103
>38489_crm-mir-35a-1:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 ctatcaccgggtgaacattggt 86
||||||||||||||||||||||
Sbjct: 49 ctatcaccgggtgaacattggt 70
>38490_crm-mir-35a-2:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 tatcaccgggtgaacattggt 86
|||||||||||||||||||||
Sbjct: 52 tatcaccgggtgaacattggt 72
>38142_cbr-mir-35c-1:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 66 tatcaccgggtgaacattggtactggtcc 94
|||||||||||||| |||||||| |||||
Sbjct: 66 tatcaccgggtgaaaattggtacaggtcc 94
>38143_cbr-mir-35c-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 66 tatcaccgggtgaacattggtactggtcc 94
|||||||||||||| |||||||| |||||
Sbjct: 52 tatcaccgggtgaaaattggtacaggtcc 80
>38498_crm-mir-35e-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 9 tgacgacgggaaccgtgctgatgttgacctcggtgatagg 48
|||||| ||||||||||||| | | ||||||||| |||||
Sbjct: 2 tgacgaggggaaccgtgctggtttcgacctcggtaatagg 41
