miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34894_sko-mir-278:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 58 agatcggtgggactttcgttcgt 80
          |||||||||||||||||||||||
Sbjct: 58 agatcggtgggactttcgttcgt 80




>38772_cte-mir-278:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 59 gatcggtgggactttcgttcgt 80
          ||||||||||||||||||||||
Sbjct: 59 gatcggtgggactttcgttcgt 80




>35078_api-mir-278:mirbase
          Length = 66

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 61 tcggtgggactttcgttcgt 80
          ||||||||||||||||||||
Sbjct: 45 tcggtgggactttcgttcgt 64