miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38776_cte-mir-317:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 tgtgaacacagctggtggtatct 81
          |||||||||||||||||||||||
Sbjct: 59 tgtgaacacagctggtggtatct 81




>35032_dpu-mir-317:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatct 81




>35087_api-mir-317:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 56 gtgaacacagctggtggtatct 77




>35227_aae-mir-317-1:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>35228_aae-mir-317-2:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatct 73




>35394_ame-mir-317:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>35567_bmo-mir-317:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>36047_cqu-mir-317:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>37592_ngi-mir-317:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 51 gtgaacacagctggtggtatct 72




>37669_nvi-mir-317:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>37801_tca-mir-317:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 45 gtgaacacagctggtggtatct 66




>37802_tca-mir-317:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 45 gtgaacacagctggtggtatct 66




>34987_isc-mir-317:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 tgtgaacacagctggtggtat 79
          |||||||||||||||||||||
Sbjct: 59 tgtgaacacagctggtggtat 79




>36146_dan-mir-317:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74




>36228_der-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>36311_dgr-mir-317:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>36471_dme-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>36472_dme-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>36817_dmo-mir-317:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatc 72




>36892_dpe-mir-317-1:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74




>36893_dpe-mir-317-2:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74




>36976_dps-mir-317:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatc 74




>37184_dse-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>37260_dsi-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75




>37396_dvi-mir-317:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatc 72




>37473_dwi-mir-317:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 53 gtgaacacagctggtggtatc 73




>37555_dya-mir-317:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 gtgaacacagctggtggtatc 80
          |||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtatc 75