miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42313_osa-MIR1884a:mirbase
          Length = 214

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 88/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  aatgtatgacgccattgactttttaacaancgtttgnccttttgtcttattaacaaaa-t 75
           |||||||||| || ||||||||||    | |||||| || ||  ||||||| | |||| |
Sbjct: 209 aatgtatgacaccgttgactttttgcataacgtttgaccattcatcttattcaaaaaagt 150

                                                         
Query: 76  tatgtaattatcatttattttattgtnacttgatttatcatcaaat 121
           ||| ||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 149 tatataaatatcatttattttattgtaacttgttttatcatcaaat 104



 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatt 220
           |||||||||| ||||| ||||||||||  | ||||||||||||||||| |||||
Sbjct: 58  ttgaataagacgaatggtcaaacgttgtatgaaaagtcaacggcgtcacacatt 5



 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatt 220
           |||||||||||||||| |||||||||    ||||||||||||| ||||||||||
Sbjct: 156 ttgaataagatgaatggtcaaacgttatgcaaaaagtcaacggtgtcatacatt 209




>42117_osa-MIR806h:mirbase
          Length = 271

 Score = 50.1 bits (25), Expect = 8e-07
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaata 226
           |||||||||| ||||| |||||| |  | |||||||||||||| |||| ||||| | | |
Sbjct: 182 ttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttagaaa 241

                    
Query: 227 cggagggag 235
           |||||||||
Sbjct: 242 cggagggag 250




>42114_osa-MIR806e:mirbase
          Length = 255

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatt 220
           |||||||||| ||| | |||||| |  | ||||||||||||||||||| |||||
Sbjct: 79  ttgaataagacgaacggtcaaacatatgctaaaaagtcaacggcgtcaaacatt 26




>42112_osa-MIR806c:mirbase
          Length = 270

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 167 ttgaataagatgaatgatcaaacgttggttaaaaagtcaacggcgtcatacatt 220
           |||||||||| ||||| |||||| |  | |||||||||||||| |||| |||||
Sbjct: 186 ttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 239




>42115_osa-MIR806f:mirbase
          Length = 241

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 196 taaaaagtcaacggcgtcatacatt 220
           ||||||||||||||||||| |||||
Sbjct: 43  taaaaagtcaacggcgtcaaacatt 19




>42113_osa-MIR806d:mirbase
          Length = 271

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 196 taaaaagtcaacggcgtcatacattaaaatacggagggag 235
           |||||||||||||| |||| |||||  || ||||||||||
Sbjct: 213 taaaaagtcaacggtgtcaaacattttaaaacggagggag 252




>42110_osa-MIR806a:mirbase
          Length = 252

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 196 taaaaagtcaacggcgtcatacattaaaatacggagggag 235
           |||||||||||||| |||| |||||  || ||||||||||
Sbjct: 205 taaaaagtcaacggtgtcaaacattttaaaacggagggag 244