miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42227_osa-MIR1846a:mirbase
Length = 112
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||
Sbjct: 22 ccggatctcccagtgaggaggccggggccgctggatccggtgaccccgttctcctcgccg 81
Query: 61 gcggatccg 69
|||||||||
Sbjct: 82 gcggatccg 90
>42226_osa-MIR1846a:mirbase
Length = 112
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||
Sbjct: 22 ccggatctcccagtgaggaggccggggccgctggatccggtgaccccgttctcctcgccg 81
Query: 61 gcggatccg 69
|||||||||
Sbjct: 82 gcggatccg 90
>42229_osa-MIR1846b:mirbase
Length = 112
Score = 97.6 bits (49), Expect = 9e-22
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| |||||| ||||||||| |||||||||||
Sbjct: 22 ccggatctcccagtgaggaggccggggccgctggatccagtgaccccgttctcctcgccg 81
Query: 61 gcggatccg 69
|||||||||
Sbjct: 82 gcggatccg 90
>42228_osa-MIR1846b:mirbase
Length = 112
Score = 97.6 bits (49), Expect = 9e-22
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| |||||| ||||||||| |||||||||||
Sbjct: 22 ccggatctcccagtgaggaggccggggccgctggatccagtgaccccgttctcctcgccg 81
Query: 61 gcggatccg 69
|||||||||
Sbjct: 82 gcggatccg 90
>42231_osa-MIR1846c:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| | |||||||||||||||||| ||||| |
Sbjct: 9 ccggatctcccagtgaggaggccggggccgctgaatccggtgaccccggtctgctcgctg 68
Query: 61 gcggatccg 69
|||||||||
Sbjct: 69 gcggatccg 77
>42230_osa-MIR1846c:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| ||||||||||||||| |||| | |||||||||||||||||| ||||| |
Sbjct: 9 ccggatctcccagtgaggaggccggggccgctgaatccggtgaccccggtctgctcgctg 68
Query: 61 gcggatccg 69
|||||||||
Sbjct: 69 gcggatccg 77
>42233_osa-MIR1846d:mirbase
Length = 116
Score = 81.8 bits (41), Expect = 6e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| |||||| ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 24 ccggatctcccagtgagtaggcccgggccgccagatccggtgaccccggtctcctcgccg 83
Query: 61 g 61
|
Sbjct: 84 g 84
>42232_osa-MIR1846d:mirbase
Length = 116
Score = 81.8 bits (41), Expect = 6e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 1 ccggatctcctagtgaggaggccgggaccgccggatccggtgaccccggtctcctcgccg 60
|||||||||| |||||| ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 24 ccggatctcccagtgagtaggcccgggccgccagatccggtgaccccggtctcctcgccg 83
Query: 61 g 61
|
Sbjct: 84 g 84
>42234_osa-MIR1846e:mirbase
Length = 69
Score = 77.8 bits (39), Expect = 9e-16
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 15 gaggaggccgggaccgccggatccggtgaccccggtctcctcgccggcggatccg 69
||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||
Sbjct: 14 gaggaggccgggaccaccggatccggtgactccggcctcctcgccggcagatccg 68
