miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 111 bits (56), Expect = 1e-25
Identities = 95/104 (91%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 2 gggtaaagtcactggaggcagcggttcatcgatctcttcctgggaa-tttggtgtga-aa 59
|||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||| ||
Sbjct: 13 gggtaaagacactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa 72
Query: 60 aatcacaga-acatgaatcgatcgataaacctctgcatccagcg 102
| |||| | ||||||||||||||||||||||||||||||||||
Sbjct: 73 taacacaaatacatgaatcgatcgataaacctctgcatccagcg 116
>41090_tcc-MIR162:mirbase
Length = 131
Score = 101 bits (51), Expect = 1e-22
Identities = 90/99 (90%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 5 taaagtcactggaggcagcggttcatcgatctcttcctgggaa-tttggtgtga-aaaat 62
||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| || |
Sbjct: 13 taaagacactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataa 72
Query: 63 cacaga-acatgaatcgatcgataaacctctgcatccag 100
|||| | |||||| |||||||||||||||||||||||||
Sbjct: 73 cacaaatacatgattcgatcgataaacctctgcatccag 111
>41578_vvi-MIR162:mirbase
Length = 103
Score = 93.7 bits (47), Expect = 3e-20
Identities = 87/98 (88%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcaca 66
||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 3 aagtcactggatgcagcggttcatcgatctcttcct--gaaattgttgtgaaaaa-agca 59
Query: 67 gaacatgaatcgatcgataaacctctgcatccagcgtt 104
|| || |||||| |||||||||||||||||||||||||
Sbjct: 60 gatcaagaatcggtcgataaacctctgcatccagcgtt 97
>41220_csi-MIR162:mirbase
Length = 201
Score = 87.7 bits (44), Expect = 2e-18
Identities = 88/101 (87%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcac 65
||||||||||||||||||||||||||||| ||| || ||||| || ||||||||| ||
Sbjct: 83 aagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataac 142
Query: 66 agaa----catgaatcgatcgataaacctctgcatccagcg 102
| || |||||||||||||||||||||||||||||||||
Sbjct: 143 acaaaatacatgaatcgatcgataaacctctgcatccagcg 183
>40342_rco-MIR162:mirbase
Length = 101
Score = 87.7 bits (44), Expect = 2e-18
Identities = 87/98 (88%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 10 tcactggaggcagcggttcatcgatctcttcctgg--gaatttggtgtgaaa-aatcaca 66
||||||||||||||||||||||||||||||||||| || |||| ||||||| || | |
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaata 60
Query: 67 gaa--catgaatcgatcgataaacctctgcatccagcg 102
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 aaacgcatgaatcgatcgataaacctctgcatccagcg 98
>40437_gma-MIR162:mirbase
Length = 102
Score = 75.8 bits (38), Expect = 6e-15
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcaca 66
||||||||||| ||||||||||||||||||||||||| | | | ||| || |||| |
Sbjct: 4 aagtcactggatgcagcggttcatcgatctcttcctg---aatcgttgtttaacatcaga 60
Query: 67 gaacatgaatcgatcgataaacctctgcatccagcg 102
| |||||||||||||||||||||||||||||||||
Sbjct: 61 -accatgaatcgatcgataaacctctgcatccagcg 95
>39812_aly-MIR162a:mirbase
Length = 228
Score = 71.9 bits (36), Expect = 9e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 8 agtcactggaggcagcggttcatcgatctcttcctgggaa 47
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctgggaa 102
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 70 catgaatcgatcgataaacctctgcatccagcgtt 104
||||||| |||||||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcgtt 160
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 11 cactggaggcagcggttcatcgatctcttcctgg 44
||||||||||||||||||||||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatctcttcctgg 42
>39813_aly-MIR162b:mirbase
Length = 184
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 70 catgaatcgatcgataaacctctgcatccagcg 102
|||||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcg 135
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaat 48
||||| ||||||||||||||||||||||| |||||| ||||
Sbjct: 44 aagtcgctggaggcagcggttcatcgatcaattcctgtgaat 85
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 8 agtcactggaggcagcggttcatcgatctcttcctg 43
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 70 catgaatcgatcgataaacctctgcatccagcgtt 104
||||||| |||||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcgtt 113
>40663_mtr-MIR162:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 68 aacatgaatcgatcgataaacctctgcatccagcg 102
||||||||||| |||||||||||||||||||||||
Sbjct: 75 aacatgaatcggtcgataaacctctgcatccagcg 109
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 9 gtcactggaggcagcggttcatcgatctcttcctg 43
||||||||| |||||||||||||||||| ||||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctg 51
>40025_ath-MIR162b:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccagcg 102
||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcg 101
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaat 48
||||| ||||||||||||||||||||||| |||||| ||||
Sbjct: 6 aagtcgctggaggcagcggttcatcgatcaattcctgtgaat 47
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 cactggaggcagcggttcatcgatctcttcctg 43
|||||||||||||||||||||||||| ||||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcctg 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 68 aacatgaatcgatcgataaacctctgcatccag 100
|||| ||| ||||||||||||||||||||||||
Sbjct: 66 aacacgaaccgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 cactggaggcagcggttcatcgatctcttcctg 43
|||||||||||||||||||||||||| ||||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcctg 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 68 aacatgaatcgatcgataaacctctgcatccag 100
|||| ||| ||||||||||||||||||||||||
Sbjct: 66 aacacgaaccgatcgataaacctctgcatccag 98
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccag 100
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccag 100
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatcc 98
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccag 100
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccag 100
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 73 gaatcgatcgataaacctctgcatccag 100
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
