miRNEST 2.0, an integrative microRNA resource :: BLAST
>40430_gma-MIR156f:mirbase
Length = 106
Score = 117 bits (59), Expect = 1e-27
Identities = 88/95 (92%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 2 atgttgacagaagagagagagcacaacccggcattaggctaaag-agtctttgcctttgt 60
||||||||||||||||||||||||||||||| | | || ||||| |||||||||||||||
Sbjct: 8 atgttgacagaagagagagagcacaacccgggaat-ggttaaaggagtctttgcctttgt 66
Query: 61 tgggagtgtgctctctcctcttctgtcatcatcac 95
||||||||||||||||| || ||||||||||||||
Sbjct: 67 tgggagtgtgctctctcttcctctgtcatcatcac 101
>40426_gma-MIR156b:mirbase
Length = 120
Score = 117 bits (59), Expect = 1e-27
Identities = 88/95 (92%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 2 atgttgacagaagagagagagcacaacccggcattaggctaaag-agtctttgcctttgt 60
||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||
Sbjct: 17 atgttgacagaagagagagagcacaacccgggaat-ggctaaaggagtctttgcctttgt 75
Query: 61 tgggagtgtgctctctcctcttctgtcatcatcac 95
||||||||||| ||||| || ||||||||||||||
Sbjct: 76 tgggagtgtgccctctcttcctctgtcatcatcac 110
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 115 bits (58), Expect = 6e-27
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 2 atgttgacagaagagagagagcacaacccggcattaggctaaagagtctttgcctttgtt 61
||||||||||||||||| ||||||||||| |||| || ||||||| ||||||| ||| ||
Sbjct: 7 atgttgacagaagagagggagcacaacccagcatcag-ctaaagactctttgcttttctt 65
Query: 62 gggagtgtgctctctcctcttctgtcatcatcac 95
|||||||||||||||| |||||||||||||||||
Sbjct: 66 gggagtgtgctctctcttcttctgtcatcatcac 99
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 111 bits (56), Expect = 9e-26
Identities = 87/95 (91%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 2 atgttgacagaagagagagagcacaacccggcattaggctaaag--agtctttgcctttg 59
|||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||
Sbjct: 17 atgttgacagaagagagagagcacaacccggcatca-gctaaagaaagtctttgcttttg 75
Query: 60 ttgggagtgtgctctctcctcttctgtcatcatca 94
||||||||||||| |||| |||||||||| |||||
Sbjct: 76 ttgggagtgtgctttctcttcttctgtcaccatca 110
>41204_aqc-MIR529:mirbase
Length = 125
Score = 97.6 bits (49), Expect = 1e-21
Identities = 86/96 (89%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 2 atgttgacagaagagagagagcacaacccggcattaggctaa--agagtctttgcctttg 59
||||||||||||||||||||||||||||| ||| | ||||| ||||||||| | ||||
Sbjct: 14 atgttgacagaagagagagagcacaacccatcatca-gctaaagagagtcttttcttttg 72
Query: 60 ttgggagtgtgctctctcctcttctgtcatcatcac 95
||||||||||||||| | ||||||||||||||||||
Sbjct: 73 ttgggagtgtgctctttgctcttctgtcatcatcac 108
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 91.7 bits (46), Expect = 8e-20
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttg 59
||||||||||||||||||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 17 aatgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttg 76
Query: 60 ttgggagtgtgctctctcctcttctgtcatcatc 93
||||||||||||||||| ||||||||||||||||
Sbjct: 77 ttgggagtgtgctctctactcttctgtcatcatc 110
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 91.7 bits (46), Expect = 8e-20
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttg 59
||||||||||||||||||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 13 aatgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttg 72
Query: 60 ttgggagtgtgctctctcctcttctgtcatcatc 93
||||||||||||||||| ||||||||||||||||
Sbjct: 73 ttgggagtgtgctctctactcttctgtcatcatc 106
>41914_osa-MIR156k:mirbase
Length = 106
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaacccggca 34
|||||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccggca 39
>40009_ath-MIR156h:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaag--agtctttgccttt 58
||||||||||||||| ||||||||||||| || ||||| |||| ||| |||||| ||
Sbjct: 7 aatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagt-tttgccctt 65
Query: 59 gttgggagtgtgctctct 76
|| |||||||||||||||
Sbjct: 66 gtcgggagtgtgctctct 83
>39797_aly-MIR156h:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaag--agtctttgccttt 58
||||||||||||||| ||||||||||||| || ||||| |||| ||| |||||| ||
Sbjct: 3 aatgttgacagaagaaagagagcacaacctgggattagcaaaaagatagt-tttgccctt 61
Query: 59 gttgggagtgtgctctct 76
|| |||||||||||||||
Sbjct: 62 gtcgggagtgtgctctct 79
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 73/85 (85%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaacccggcattaggctaa--agagtctttgcctttgttgg 63
||||||||||||| ||||||||||| | | || ||||| ||||||||||| |||||| |
Sbjct: 11 tgacagaagagagggagcacaaccctgtaata-gctaaagagagtctttgcttttgtt-g 68
Query: 64 gagtgtgctctctcctcttctgtca 88
|| |||||| |||| ||||||||||
Sbjct: 69 gactgtgctttctcttcttctgtca 93
>42687_zma-MIR156j:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaaccc 30
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaaccc 30
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41867_far-MIR156b:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 gttgacagaagagagagagcaca 26
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 gttgacagaagagagagagcaca 26
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 gttgacagaagagagagagcaca 26
|||||||||||||||||||||||
Sbjct: 99 gttgacagaagagagagagcaca 121
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaacc 29
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>41877_far-MIR529:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ttgacagaagagagagagcaca 26
||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaac 28
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaac 28
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaac 28
||||||||||||| ||||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaac 29
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcaca 26
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaa 27
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcacaa 27
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40336_rco-MIR156g:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 67 tgtgctctctcctcttctgtcatcatcac 95
|||||||||| |||||||||||||||||
Sbjct: 68 tgtgctctctagtcttctgtcatcatcac 96
>41913_osa-MIR156j:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
|||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62
>41911_osa-MIR156h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
|||||||||||||||| |||||||
Sbjct: 6 tgttgacagaagagagtgagcaca 29
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgttgacagaagagagagagcaca 26
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaacc 29
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
