miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 ttttgttgacagaagatagagagcacaacttaacataccca 41
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 16 ttttgttgacagaagatagagagcacaactgaacataccca 56
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaacttaacatacccaa 42
||||||||||||||||||||||||||| |||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaactgaacatacccaa 47
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tttgttgacagaagatagagagcaca 27
||||||||||||||||||||||||||
Sbjct: 2 tttgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tttgttgacagaagatagagagcaca 27
||||||||||||||||||||||||||
Sbjct: 20 tttgttgacagaagatagagagcaca 45
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 ttgacagaagatagagagcacaa 28
|||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcacaa 85
>40427_gma-MIR156c:mirbase
Length = 185
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaac 169
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcacaa 28
||||||||||||||||||||||||||
Sbjct: 20 ttgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcacaa 28
||||||||||||||||||||||||||
Sbjct: 20 ttgttgacagaagatagagagcacaa 45
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 18 ttgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 2 ttgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 2 ttgttgacagaagatagagagcaca 26
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcaca 27
>40428_gma-MIR156d:mirbase
Length = 151
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 18 ttgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcaca 27
|||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcaca 27
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcaca 27
||||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tttgtgctcttttttcttctgtca 89
|||||||||||| |||||||||||
Sbjct: 66 tttgtgctctttattcttctgtca 89
>40336_rco-MIR156g:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>40310_bra-MIR157a:mirbase
Length = 149
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 11 ttgttgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 15 ttgttgacagaagatagagagcac 38
>40259_bna-MIR156b:mirbase
Length = 208
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 22 ttgttgacagaagatagagagcac 45
>40012_ath-MIR157c:mirbase
Length = 217
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 21 ttgttgacagaagatagagagcac 44
>40011_ath-MIR157b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcaca 27
||||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcaca 27
||||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39800_aly-MIR157c:mirbase
Length = 293
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||||||||
Sbjct: 52 ttgttgacagaagatagagagcac 75
>39799_aly-MIR157b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcaca 27
||||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcaca 27
||||||||||||||||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcac 26
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>40429_gma-MIR156e:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcac 26
|||||||||||||||||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41
>39416_pta-MIR156b:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcacaac 29
|||||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcacaac 25
>41204_aqc-MIR529:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 15 tgttgacagaagagagagagcacaac 40
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 18 tgttgacagaagagagagagcacaac 43
>40430_gma-MIR156f:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagagagagagcacaac 34
>40426_gma-MIR156b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 18 tgttgacagaagagagagagcacaac 43
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagagagagagcacaac 44
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 15 tgttgacagaagagagagagcacaac 40
>40334_rco-MIR156e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 3 tgttgacagaagagagagagcacaac 28
>40009_ath-MIR156h:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagaaagagagcacaac 34
>39797_aly-MIR156h:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagagcacaac 29
||||||||||||| ||||||||||||
Sbjct: 5 tgttgacagaagaaagagagcacaac 30
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagagcac 26
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagagcac 26
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41525_sly-MIR156a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagagcac 26
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcaca 27
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcaca 27
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>39727_smo-MIR156b:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcaca 27
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcaca 27
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagagcac 26
||||||||||||||||||| ||||
Sbjct: 3 ttgttgacagaagatagagggcac 26
>40013_ath-MIR157d:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcac 26
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>39801_aly-MIR157d:mirbase
Length = 256
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagagcac 26
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
