miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40633_gso-MIR482a:mirbase
          Length = 93

 Score =  161 bits (81), Expect = 1e-40
 Identities = 90/93 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggggaagacatgggtatggggggattgggaaggaatattcataagcaaaatatgttattt 60
          ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 1  ggggaaggcatgggtatggggggattgggaaggaatatccataagcaaaatatgctattt 60

                                           
Query: 61 cttccctacacctcccataccactgtttttcct 93
          |||||||||||||||||||||||||||||||||
Sbjct: 61 cttccctacacctcccataccactgtttttcct 93




>40482_gma-MIR482b:mirbase
          Length = 69

 Score =  121 bits (61), Expect = 9e-29
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                      
Query: 13 ggtatggggggattgggaaggaatattcataagcaaaatatgttatttcttccctacacc 72
          |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 1  ggtatggggggattgggaaggaatatccataagcaaaatatgctatttcttccctacacc 60

                   
Query: 73 tcccatacc 81
          |||||||||
Sbjct: 61 tcccatacc 69