miRNEST 2.0, an integrative microRNA resource :: BLAST
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64
|||||||||||||||||||||||| ||||||||||||| | ||||||||||||| ||
Sbjct: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttctat 70
Query: 65 ttggcatgaagggag 79
||||||||| |||||
Sbjct: 71 ttggcatgaggggag 85
>40341_rco-MIR160c:mirbase
Length = 94
Score = 73.8 bits (37), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64
|||||||||||||||||||||||| |||||||||||||| | ||||||| || | ||
Sbjct: 6 tgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttcctat 65
Query: 65 ttggcatgaagggagccatgcaggc 89
||||||||| ||||| |||||||||
Sbjct: 66 ttggcatgaggggagtcatgcaggc 90
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa 44
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 21 tgcctggctccctgaatgccatctaagaagcttgtcaaa 59
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaa 43
|||||||||||||||||||||||| |||||||||||||
Sbjct: 11 tgcctggctccctgaatgccatctaagaagcttgtcaa 48
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 65.9 bits (33), Expect = 5e-12
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64
|||||||||||||||||||||||| |||||||||| ||| | ||| ||||||| | ||
Sbjct: 11 tgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcctat 70
Query: 65 ttggcatgaagggagccatgcaggc 89
||||||||| ||||| || ||||||
Sbjct: 71 ttggcatgaggggagtcaagcaggc 95
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagc 36
|||||||||||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgaatgccatctgagaagc 61
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa 44
|||||||||||||||||||||||| |||||||||||||
Sbjct: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaa 49
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaa 43
|||||||||||||| ||||||||| |||||||||||||
Sbjct: 1 tgcctggctccctggatgccatctaagaagcttgtcaa 38
>41928_osa-MIR160f:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagc 36
||||||||||||||||||||||| |||||||
Sbjct: 11 tgcctggctccctgaatgccatccgagaagc 41
>39461_ppt-MIR160g:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 7e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaaacgattg 51
||||||||||| || |||||||||| |||||||| |||||| ||||
Sbjct: 30 tgcctggctccttgtatgccatctgcgaagcttgacaaaactattg 75
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgaga 33
||||||||||||||||||||||| ||||
Sbjct: 1 tgcctggctccctgaatgccatccgaga 28
>39732_smo-MIR160b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagc 36
|||||||||||||| |||||| |||||||||
Sbjct: 13 tgcctggctccctgtatgccacctgagaagc 43
>40399_ahy-MIR160:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccat 27
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgaatgccat 42
>40398_ahy-MIR160:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccat 27
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgaatgccat 42
>39462_ppt-MIR160h:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 gcctggctccctgaatgccatctgagaagcttgt 40
|||||||||| || |||||| |||||||||||||
Sbjct: 30 gcctggctccttgtatgccaactgagaagcttgt 63
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaaacgattg 51
|||||||||||||| |||||| ||| | ||||||||||| |||||
Sbjct: 30 tgcctggctccctgtatgccacctgcggggcttgtcaaaatgattg 75
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctg 30
|||||||||||||| ||||||||||
Sbjct: 11 tgcctggctccctgtatgccatctg 35
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgaatgccatctg 30
|||||||||||||| ||||||||||
Sbjct: 20 tgcctggctccctgtatgccatctg 44
