miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40692_mtr-MIR169o:mirbase
Length = 89
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 61
Query: 61 gctggcagttgtcattggttcatgtt 86
||||||||||||||||||||||||||
Sbjct: 62 gctggcagttgtcattggttcatgtt 87
>40691_mtr-MIR169n:mirbase
Length = 89
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 61
Query: 61 gctggcagttgtcattggttcatgtt 86
||||||||||||||||||||||||||
Sbjct: 62 gctggcagttgtcattggttcatgtt 87
>40686_mtr-MIR169i:mirbase
Length = 89
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 61
Query: 61 gctggcagttgtcattggttcatgtt 86
||||||||||||||||||||||||||
Sbjct: 62 gctggcagttgtcattggttcatgtt 87
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ttgagccaaagatgacttgccggca 28
||||||||| |||||||||||||||
Sbjct: 10 ttgagccaaggatgacttgccggca 34
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gatttgagccaaagatgacttgccg 25
|||||||||||| ||||||||||||
Sbjct: 7 gatttgagccaaggatgacttgccg 31
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gatttgagccaaagatgacttgccg 25
|||||||||||| ||||||||||||
Sbjct: 7 gatttgagccaaggatgacttgccg 31
>40453_gma-MIR169e:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 tttgagccaaagatgacttgccggc 27
|||||||||| ||||||||||||||
Sbjct: 30 tttgagccaaggatgacttgccggc 54
>40284_bna-MIR169m:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 tgagccaaagatgacttgccg 25
|||||||||||||||||||||
Sbjct: 45 tgagccaaagatgacttgccg 65
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 gagccaaagatgacttgccggcat 29
||||||| ||||||||||||||||
Sbjct: 12 gagccaaggatgacttgccggcat 35
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgagccaaagatgacttgccggca 28
|||||||| |||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccggca 34
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tttgagccaaagatgacttgccgg 26
|||||||||| |||||||||||||
Sbjct: 19 tttgagccaaggatgacttgccgg 42
>42758_zma-MIR169p:mirbase
Length = 65
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 agccaaagatgacttgccggcat 29
|||||| ||||||||||||||||
Sbjct: 3 agccaaggatgacttgccggcat 25
>42533_sbi-MIR169e:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 agccaaagatgacttgccggcat 29
|||||| ||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggcat 24
>41610_vvi-MIR169n:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 gagccaaagatgacttgccggca 28
||||||| |||||||||||||||
Sbjct: 12 gagccaaggatgacttgccggca 34
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 agccaaagatgacttgccggcat 29
|||||| ||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggcat 34
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 agccaaagatgacttgccggcat 29
|||||| ||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggcat 34
>40450_gma-MIR169b:mirbase
Length = 183
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 7 agccaaagatgacttgccg 25
|||||||||||||||||||
Sbjct: 173 agccaaagatgacttgccg 155
>40356_rco-MIR169a:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 agccaaagatgacttgccggcat 29
|||||| ||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggcat 29
>40051_ath-MIR169g:mirbase
Length = 379
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 ttgagccaaagatgacttgccgg 26
||||||||| |||||||||||||
Sbjct: 143 ttgagccaaggatgacttgccgg 165
>40050_ath-MIR169f:mirbase
Length = 167
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 ttgagccaaagatgacttgccgg 26
||||||||| |||||||||||||
Sbjct: 31 ttgagccaaggatgacttgccgg 53
>39840_aly-MIR169g:mirbase
Length = 202
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 ttgagccaaagatgacttgccgg 26
||||||||| |||||||||||||
Sbjct: 62 ttgagccaaggatgacttgccgg 84
>39839_aly-MIR169f:mirbase
Length = 184
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 ttgagccaaagatgacttgccgg 26
||||||||| |||||||||||||
Sbjct: 40 ttgagccaaggatgacttgccgg 62
