miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40692_mtr-MIR169o:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 60
Query: 61 tgctggcagttgtcattggttcatgtttg 89
|||||||||||||||||||||||||||||
Sbjct: 61 tgctggcagttgtcattggttcatgtttg 89
>40691_mtr-MIR169n:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 60
Query: 61 tgctggcagttgtcattggttcatgtttg 89
|||||||||||||||||||||||||||||
Sbjct: 61 tgctggcagttgtcattggttcatgtttg 89
>40685_mtr-MIR169h:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgtttt 60
Query: 62 gctggcagttgtcattggttcatgtt 87
||||||||||||||||||||||||||
Sbjct: 61 gctggcagttgtcattggttcatgtt 86
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgagccaaagatgacttgccggca 29
||||||||| |||||||||||||||
Sbjct: 10 ttgagccaaggatgacttgccggca 34
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gatttgagccaaagatgacttgccg 26
|||||||||||| ||||||||||||
Sbjct: 7 gatttgagccaaggatgacttgccg 31
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gatttgagccaaagatgacttgccg 26
|||||||||||| ||||||||||||
Sbjct: 7 gatttgagccaaggatgacttgccg 31
>40453_gma-MIR169e:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 tttgagccaaagatgacttgccggc 28
|||||||||| ||||||||||||||
Sbjct: 30 tttgagccaaggatgacttgccggc 54
>40284_bna-MIR169m:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgagccaaagatgacttgccg 26
|||||||||||||||||||||
Sbjct: 45 tgagccaaagatgacttgccg 65
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 gagccaaagatgacttgccggcat 30
||||||| ||||||||||||||||
Sbjct: 12 gagccaaggatgacttgccggcat 35
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tgagccaaagatgacttgccggca 29
|||||||| |||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccggca 34
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 tttgagccaaagatgacttgccgg 27
|||||||||| |||||||||||||
Sbjct: 19 tttgagccaaggatgacttgccgg 42
