miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40680_mtr-MIR169c:mirbase
          Length = 85

 Score =  168 bits (85), Expect = 4e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gaatgcagccaagggtgatttgccggcagatatatatgaatattcatagagatgcatgtg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gaatgcagccaagggtgatttgccggcagatatatatgaatattcatagagatgcatgtg 60

                                   
Query: 61 tcggcaagttcctcttggctacatt 85
          |||||||||||||||||||||||||
Sbjct: 61 tcggcaagttcctcttggctacatt 85




>41361_ptc-MIR169g:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 1  gaatgcagccaagggtgatttgccggca 28
          |||||||||||||| ||| |||||||||
Sbjct: 6  gaatgcagccaaggatgacttgccggca 33




>41358_ptc-MIR169d:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 1  gaatgcagccaagggtgatttgccggca 28
          |||||||||||||| ||| |||||||||
Sbjct: 6  gaatgcagccaaggatgacttgccggca 33




>41380_ptc-MIR169z:mirbase
          Length = 118

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 1  gaatgcagccaagggtgatttgccggc 27
          |||||||||||||  ||||||||||||
Sbjct: 6  gaatgcagccaagaatgatttgccggc 32