miRNEST 2.0, an integrative microRNA resource :: BLAST
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 147 bits (74), Expect = 4e-36
Identities = 155/178 (87%), Gaps = 8/178 (4%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatggaagggtaaggggtttgaattacctgctgactc 77
||||||||||||||||||||||||||||| |||| ||||||||| |||| |||| |||||
Sbjct: 9 aagagagcttccttcagtccactcatggatgggttaggggtttggattagctgccgactc 68
Query: 78 attgattcaaacacaatagacaat---tatggggttatgctattgtgaatgtgtgaatga 134
||| ||||||||||| ||| ||| |||| ||| | ||| |||||||||||||||||
Sbjct: 69 attcattcaaacacagtag--aatggaaatggagtt-tactactgtgaatgtgtgaatga 125
Query: 135 tgcaggaggtgaatttcttccttttct--tctttgcttggactgaagggagctccctt 190
||| |||||| |||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 126 tgcgggaggtaaatttcatccttttcttgtctgtgcttggactgaagggagctccctt 183
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 123 bits (62), Expect = 6e-29
Identities = 150/176 (85%), Gaps = 5/176 (2%)
Strand = Plus / Plus
Query: 21 agagcttccttcagtccactcatggaagggtaaggggtttgaattacctgctgactcatt 80
|||||||||||||||||||||||||| ||| | ||||||| |||| |||| ||||||||
Sbjct: 12 agagcttccttcagtccactcatggacgggcgaagggtttggattagctgccgactcatt 71
Query: 81 gattcaaacacaatagacaatta-tgg--ggttatgctattgtgaatgtgtgaatgatgc 137
||||||||||| ||||||| | ||| | ||||||||||||||||||||||| ||
Sbjct: 72 cattcaaacacagtagacaaggagtggcagcggctgctattgtgaatgtgtgaatgacgc 131
Query: 138 aggaggtgaatttcttccttttct--tctttgcttggactgaagggagctcccttt 191
|||| | |||||| ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 132 gggagattaatttcatccttttcttctctgtgcttggactgaagggagctcccttt 187
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 123 bits (62), Expect = 6e-29
Identities = 154/183 (84%), Gaps = 10/183 (5%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatggaagggtaaggggtttgaattacctgctgactc 77
|||||||||| |||||||||||||||||| ||| | ||||||| |||| |||| |||||
Sbjct: 9 aagagagctttcttcagtccactcatggacgggcgaagggtttggattagctgccgactc 68
Query: 78 attgattcaaacacaatagacaattatggggtta-------tgctattgtgaatgtgtga 130
||| ||||||||||| |||| ||||| ||| | |||||||||||||||||||
Sbjct: 69 attcattcaaacacagtaga-aattaagggagcagtatggctgctattgtgaatgtgtga 127
Query: 131 atgatgcaggaggtgaatttcttccttttct--tctttgcttggactgaagggagctccc 188
||||||| |||| | |||||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 128 atgatgcgggagataaatttcatccttttcttctctgtgcttggactgaagggagctccc 187
Query: 189 ttt 191
|||
Sbjct: 188 ttt 190
>40369_rco-MIR319c:mirbase
Length = 188
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 112 tgctattgtgaatgtgtgaatgatgcaggaggtgaatttcttccttttct--tctttgct 169
|||||||||||||||||||||||||| |||| | |||||| | ||| ||| ||| ||||
Sbjct: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttcatacttctcttctctgtgct 163
Query: 170 tggactgaagggagctcccttt 191
||||||||||||||||||||||
Sbjct: 164 tggactgaagggagctcccttt 185
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 60.0 bits (30), Expect = 7e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 agagagcttccttcagtccactcatgga-agggtaaggggtttgaattacctgctgactc 77
|||||||||||||||| ||||||||||| ||| || ||| |||||||| |||| |||||
Sbjct: 11 agagagcttccttcagcccactcatggataggagaaaggggttgaattagctgccgactc 70
Query: 78 attgattcaa 87
||| ||||||
Sbjct: 71 attcattcaa 80
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 161 ttctttgcttggactgaagggagctcc 187
|||| ||||||||||||||||||||||
Sbjct: 166 ttctgtgcttggactgaagggagctcc 192
>40465_gma-MIR319b:mirbase
Length = 208
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccctttttct 195
||||||||||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctccctttttct 196
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatgg 45
|||||||||| |||||||||||| ||||
Sbjct: 19 aagagagctttcttcagtccacttatgg 46
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 tgaagagagcttccttcagtccactcatgg 45
|||||||||||| |||||||||||||||||
Sbjct: 7 tgaagagagctttcttcagtccactcatgg 36
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccctt 190
|||||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctccctt 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccctttttctattt 199
|||||||||||||||||||||||| ||| |||||
Sbjct: 188 tgcttggactgaagggagctccctatttttattt 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 17 gaagagagcttccttcagtccactcatgga 46
||||||||||| |||| |||||||||||||
Sbjct: 38 gaagagagctttcttcggtccactcatgga 67
>41995_osa-MIR319b:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 gaagagagcttccttcagtccactcatgg 45
||||||||| |||||||||||||||||||
Sbjct: 9 gaagagagcgtccttcagtccactcatgg 37
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||||||||||||||||| |||||||
Sbjct: 161 tctttgcttggactgaagggtgctccct 188
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccctttt 192
|||||||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctccctttt 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatgg 45
|||||||||| ||| |||||||||||||
Sbjct: 2 aagagagctttctttagtccactcatgg 29
>40464_gma-MIR319a:mirbase
Length = 207
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccctttt 192
|||||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccctttt 192
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatgg 45
|||||||||| |||||||||||||||||
Sbjct: 19 aagagagctttcttcagtccactcatgg 46
>42783_zma-MIR319d:mirbase
Length = 212
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||||||||||||||||| |||||||
Sbjct: 167 tctttgcttggactgaagggtgctccct 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 gaagagagcttccttcagtccactca 42
||||||||| ||||||||||||||||
Sbjct: 18 gaagagagcgtccttcagtccactca 43
>42781_zma-MIR319b:mirbase
Length = 213
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||||||||||||||||| |||||||
Sbjct: 168 tctttgcttggactgaagggtgctccct 195
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 gaagagagcttccttcagtccactca 42
||||||||| ||||||||||||||||
Sbjct: 19 gaagagagcgtccttcagtccactca 44
>42642_tae-MIR319:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccct 189
||||||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctccct 204
>42563_sbi-MIR319:mirbase
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||||||||||||||||| |||||||
Sbjct: 184 tctttgcttggactgaagggtgctccct 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 gaagagagcttccttcagtccactca 42
||||||||| ||||||||||||||||
Sbjct: 31 gaagagagcgtccttcagtccactca 56
>41770_bdi-MIR319:mirbase
Length = 280
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccct 189
||||||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctccct 246
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatgg 45
|||||||||| |||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgg 36
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctcccttt 191
||||||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcccttt 182
>40367_rco-MIR319a:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 aagagagcttccttcagtccactcatgg 45
|||||||||| |||||||||||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgg 30
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctcccttt 191
||||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcccttt 208
>40070_ath-MIR319b:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccct 189
||||||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctccct 172
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 19 agagagcttccttcagtccactcatgga 46
||||||||| |||| |||||||||||||
Sbjct: 1 agagagctttcttcggtccactcatgga 28
>40069_ath-MIR319a:mirbase
Length = 176
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||| |||||||||||||||||||||
Sbjct: 147 tctttgattggactgaagggagctccct 174
>39858_aly-MIR319a:mirbase
Length = 221
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tctttgcttggactgaagggagctccct 189
|||||| |||||||||||||||||||||
Sbjct: 170 tctttgattggactgaagggagctccct 197
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccctt 190
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 161 ttctttgcttggactgaagggagctcc 187
|||| ||||||||||||||||||||||
Sbjct: 168 ttctgtgcttggactgaagggagctcc 194
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 ttggactgaagggagctcccttt 191
|||||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctcccttt 179
>41282_ctr-MIR319:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 166 tgcttggactgaagggagctccc 188
|||||||||||||||||||||||
Sbjct: 154 tgcttggactgaagggagctccc 176
>39740_smo-MIR319:mirbase
Length = 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccctt 190
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>41185_aqc-MIR319:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccct 189
||||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccct 175
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccct 189
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 167 gcttggactgaagggagctcc 187
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccc 188
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccc 188
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctccc 188
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>39424_pta-MIR319:mirbase
Length = 206
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 163 ctttgcttggactgaagggagctcc 187
||||| |||||||||||||||||||
Sbjct: 178 ctttggttggactgaagggagctcc 202
>39417_pta-MIR159a:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 163 ctttgcttggactgaagggagctcc 187
||||| |||||||||||||||||||
Sbjct: 33 ctttggttggactgaagggagctcc 9
>42780_zma-MIR319a:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 169 ttggactgaagggagctccctttt 192
||||||||||||| ||||||||||
Sbjct: 171 ttggactgaagggtgctccctttt 194
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 ttggactgaagggagctccc 188
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctcc 187
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctcc 187
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 cttggactgaagggagctcc 187
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
