miRNEST 2.0, an integrative microRNA resource :: BLAST
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcct 43
||||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcct 43
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 96 ggatcatgccatccctttggatttctccttt 126
||||||||| ||||||||||||| |||||||
Sbjct: 78 ggatcatgctatccctttggattcctccttt 108
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 96 ggatcatgccatccctttggatttctccttt 126
||||||||| ||||||||||||| |||||||
Sbjct: 51 ggatcatgctatccctttggattcctccttt 81
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 ggatcatgccatccctttggatttctcct 124
||||||||| ||||||||||||| |||||
Sbjct: 56 ggatcatgctatccctttggattcctcct 84
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 ggatcatgccatccctttggatttctcct 124
||||||||| ||||||||||||| |||||
Sbjct: 57 ggatcatgctatccctttggattcctcct 85
>40470_gma-MIR393:mirbase
Length = 120
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 93 ttgggatcatgccatccctttggatttctccttt 126
|||||||||||| |||||||||||||||||||||
Sbjct: 87 ttgggatcatgctatccctttggatttctccttt 120
>39866_aly-MIR393b:mirbase
Length = 169
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 5 gcaacttgaggaggcatccaaagggatcgcattgatccta 44
|||||| ||| | |||||||||||||||||||||||||||
Sbjct: 2 gcaactagagaaagcatccaaagggatcgcattgatccta 41
>39865_aly-MIR393a:mirbase
Length = 147
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 5 gcaacttgaggaggcatccaaagggatcgcattgatccta 44
|||||| ||||| | |||||||||||||||||||||||||
Sbjct: 2 gcaactagaggaaggatccaaagggatcgcattgatccta 41
>42566_sbi-MIR393:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
||||| |||||||||||||||||||||||||
Sbjct: 11 gaggaagcatccaaagggatcgcattgatcc 41
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 9 cttgaggaggcatccaaagggatcgcattgatcct 43
|||| ||| ||||||||||||||||||||||||||
Sbjct: 24 cttggggaagcatccaaagggatcgcattgatcct 58
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 aggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatcc 27
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 93 ttgggatcatgccatccctttggatt 118
|||||||||||| |||||||||||||
Sbjct: 91 ttgggatcatgctatccctttggatt 116
>41997_osa-MIR393:mirbase
Length = 115
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 gcatccaaagggatcgcattgatcct 43
||||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcct 33
>41238_csi-MIR393:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 3 ctgcaacttgaggaggcatccaaagggatcgcattgatccta 44
|||||||| ||||| |||||||||||||||||||||||||
Sbjct: 3 ctgcaactagaggataaatccaaagggatcgcattgatccta 44
>40076_ath-MIR393b:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatccta 44
|||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatccta 34
>40075_ath-MIR393a:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatccta 44
|||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatccta 34
>40295_bna-MIR393:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatccta 44
||||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatccta 24
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
