miRNEST 2.0, an integrative microRNA resource :: BLAST
>40476_gma-MIR396d:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 8e-14
Identities = 82/97 (84%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttctttcgtatcttaaatctgt----tttcaagatt 56
||||||||||||||||||||||||||||| | |||||| |||| | || || |||
Sbjct: 6 tgcttttccacagctttcttgaacttcttatgcatcttatatctctccacttccagcatt 65
Query: 57 aaaagtcctagaagctcaagaaagctgtgggagaata 93
||| |||||||||||||||||||||||||||||||
Sbjct: 66 ttaagccctagaagctcaagaaagctgtgggagaata 102
>40474_gma-MIR396b:mirbase
Length = 126
Score = 71.9 bits (36), Expect = 8e-14
Identities = 82/97 (84%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttctttcgtatcttaaatctgtt----ttcaagatt 56
||||||||||||||||||||||||||||| | |||||| |||| | | || ||||
Sbjct: 16 tgcttttccacagctttcttgaacttcttatgcatcttatatctctccacctccaggatt 75
Query: 57 aaaagtcctagaagctcaagaaagctgtgggagaata 93
||| |||||||||||||||||||||||||||||||
Sbjct: 76 ttaagccctagaagctcaagaaagctgtgggagaata 112
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttcttt 30
||||||||||||||||||||||||||||||
Sbjct: 6 tgcttttccacagctttcttgaacttcttt 35
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 67 gaagctcaagaaagctgtgggagaa 91
|||||||||||||||||||||||||
Sbjct: 116 gaagctcaagaaagctgtgggagaa 140
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttctt 29
|||||||||||||||||||||||||||||
Sbjct: 9 tgcttttccacagctttcttgaacttctt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 8 ccacagctttcttgaacttc 27
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>40475_gma-MIR396c:mirbase
Length = 117
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttctt 29
|||||||||||||||||||||||||||||
Sbjct: 16 tgcttttccacagctttcttgaacttctt 44
>40379_rco-MIR396:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttctt 29
|||||||||||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaacttctt 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tcaagaaagctgtgggagaa 91
||||||||||||||||||||
Sbjct: 101 tcaagaaagctgtgggagaa 120
>41243_csi-MIR396c:mirbase
Length = 178
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaacttctttc 31
||||||||||||||||||||||||||||
Sbjct: 11 ttttccacagctttcttgaacttctttc 38
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttc 27
|||||||||||||||||||||||||||
Sbjct: 6 tgcttttccacagctttcttgaacttc 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 67 gaagctcaagaaagctgtgggagaa 91
||||||||||||||| |||||||||
Sbjct: 125 gaagctcaagaaagccgtgggagaa 149
>41212_ccl-MIR396:mirbase
Length = 277
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttc 27
|||||||||||||||||||||||||||
Sbjct: 138 tgcttttccacagctttcttgaacttc 164
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 agctcaagaaagctgtgggagaa 91
|||||||||||||||||||||||
Sbjct: 233 agctcaagaaagctgtgggagaa 255
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaacttcttt 30
||||||||||||||||||||||||| ||||
Sbjct: 9 tgcttttccacagctttcttgaactacttt 38
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tagaagctcaagaaagctgtgggag 89
|||||||||||||||||||||||||
Sbjct: 82 tagaagctcaagaaagctgtgggag 106
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaactt 26
||||||||||||||||||||||||||
Sbjct: 16 tgcttttccacagctttcttgaactt 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gaagctcaagaaagctgtggga 88
||||||||||||||||||||||
Sbjct: 109 gaagctcaagaaagctgtggga 130
>42812_zma-MIR396f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttccacagctttcttgaacttctt 29
|||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttctt 25
>42811_zma-MIR396e:mirbase
Length = 166
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttccacagctttcttgaacttctt 29
|||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttctt 25
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 tttccacagctttcttgaacttct 28
||||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttct 43
>42028_osa-MIR396c:mirbase
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 tttccacagctttcttgaacttct 28
||||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttct 33
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaacttc 27
||||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttc 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 tgcttttccacagctttcttgaacttctt 29
|||| |||||| |||||||||||||||||
Sbjct: 99 tgctattccacggctttcttgaacttctt 71
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 tgcttttccacagctttcttgaacttct 28
||||||||||| ||||||||||||||||
Sbjct: 129 tgcttttccacggctttcttgaacttct 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaacttct 28
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43
>40086_ath-MIR396b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 cttttccacagctttcttgaactt 26
||||||||||||||||||||||||
Sbjct: 8 cttttccacagctttcttgaactt 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gaagctcaagaaagctgtggga 88
||||||||||||||||||||||
Sbjct: 104 gaagctcaagaaagctgtggga 125
>39426_pta-MIR396:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 cttttccacagctttcttgaactt 26
||||||||||||||||||||||||
Sbjct: 14 cttttccacagctttcttgaactt 37
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 tttccacagctttcttgaacttc 27
|||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaacttc 53
>39878_aly-MIR396b:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaactt 26
|||||||||||||||||||||||
Sbjct: 30 ttttccacagctttcttgaactt 52
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 agaagctcaagaaagctgtggga 88
|||||||||||||||||||||||
Sbjct: 131 agaagctcaagaaagctgtggga 153
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaactt 26
||||||||||| ||||||||||||||
Sbjct: 6 tgcttttccacggctttcttgaactt 31
>41242_csi-MIR396b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaact 25
||||||||||||||||||||||
Sbjct: 18 ttttccacagctttcttgaact 39
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaactt 26
||||||||||| ||||||||||||||
Sbjct: 16 tgcttttccacggctttcttgaactt 41
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaact 25
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaactt 26
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaactt 26
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>39379_pab-MIR396a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaact 25
|||| ||||||||||||||||||||
Sbjct: 11 tgctcttccacagctttcttgaact 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 agctcaagaaagctgtggga 88
||||||||||||||||||||
Sbjct: 64 agctcaagaaagctgtggga 83
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 4 ttttccacagctttcttgaa 23
||||||||||||||||||||
Sbjct: 109 ttttccacagctttcttgaa 90
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ttccacagctttcttgaact 25
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcttttccacagctttcttgaac 24
||||||||||| ||||||||||||
Sbjct: 6 tgcttttccacggctttcttgaac 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 8 ccacagctttcttgaacttc 27
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
>39381_pab-MIR396c:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 ttttccacagctttcttgaacttc 27
|||||||| |||||||||||||||
Sbjct: 23 ttttccacggctttcttgaacttc 46