miRNEST 2.0, an integrative microRNA resource :: BLAST
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 77.8 bits (39), Expect = 1e-15
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 5 acagggtcgacatgagaccacatgaagctatcatatttgtctatgttatccaactcatgt 64
|||||| |||| |||||||||||||| |||||||| |||||| | || || ||| |||
Sbjct: 5 acagggccgacccgagaccacatgaagttatcatatgtgtctaagctacacatctcgtgt 64
Query: 65 gttctcaggtcgcccctgctgaa 87
|||||||||||||||||||||||
Sbjct: 65 gttctcaggtcgcccctgctgaa 87
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 ctcatgtgttctcaggtcgcccctgctg 85
||||||||||||||||||||||||||||
Sbjct: 54 ctcatgtgttctcaggtcgcccctgctg 81
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 ctcatgtgttctcaggtcgcccctgctg 85
||||||||||||||||||||||||||||
Sbjct: 54 ctcatgtgttctcaggtcgcccctgctg 81
>42645_tae-MIR398:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 55 caactcatgtgttctcaggtcgcccctgctg 85
|||||||||||||||||||||||||| ||||
Sbjct: 78 caactcatgtgttctcaggtcgcccccgctg 108
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 tcatgtgttctcaggtcgcccctgc 83
|||||||||||||||||||||||||
Sbjct: 53 tcatgtgttctcaggtcgcccctgc 77
>40382_rco-MIR398b:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 tcatgtgttctcaggtcgcccctgc 83
|||||||||||||||||||||||||
Sbjct: 98 tcatgtgttctcaggtcgcccctgc 122
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccctgc 83
||||||||||||||||||||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccctgc 83
||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>40091_ath-MIR398c:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 tcatgtgttctcaggtcgcccctgctga 86
||||||||||||||||| ||||||||||
Sbjct: 82 tcatgtgttctcaggtcacccctgctga 109
>40090_ath-MIR398b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 tcatgtgttctcaggtcgcccctgctga 86
||||||||||||||||| ||||||||||
Sbjct: 83 tcatgtgttctcaggtcacccctgctga 110
>41801_bdi-MIR398c:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccctg 82
|||||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccctg 107
>41799_bdi-MIR398a:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccctg 82
|||||||||||||||||||||||
Sbjct: 94 catgtgttctcaggtcgcccctg 116
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 atgtgttctcaggtcgcccctgc 83
|||||||||||||||||||||||
Sbjct: 84 atgtgttctcaggtcgcccctgc 106
>39882_aly-MIR398b:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccctgctga 86
|||||||||||||||| ||||||||||
Sbjct: 89 catgtgttctcaggtcacccctgctga 115
>42040_osa-MIR398b:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tgtgttctcaggtcgcccctgc 83
||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79
>42818_zma-MIR398b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccc 80
|||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccc 105
>42817_zma-MIR398a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccc 80
|||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 58 ctcatgtgttctcaggtcgcccc 80
||||||||||||||| |||||||
Sbjct: 24 ctcatgtgttctcagttcgcccc 2
>42588_sbi-MIR398:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 catgtgttctcaggtcgcccc 80
|||||||||||||||||||||
Sbjct: 86 catgtgttctcaggtcgcccc 106
