miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40738_mtr-MIR399h:mirbase
          Length = 90

 Score = 75.8 bits (38), Expect = 7e-15
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 16  aatgatagggaaaatctcttttggcagagaggagtaaaaatcttaaacaggaatgtttct 75
           |||||||| | |||||||| ||||||||  | |||| ||| |||  ||| | ||| ||||
Sbjct: 1   aatgatagagcaaatctctattggcagaacgaagtagaaagcttggacatgcatgcttct 60

                                         
Query: 76  ggtttgccaaaggagatttgccctgccatt 105
           ||||||||||||||||||||||||||||||
Sbjct: 61  ggtttgccaaaggagatttgccctgccatt 90




>40739_mtr-MIR399i:mirbase
          Length = 90

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 72  ttctggtttgccaaaggagatttgccctgccatt 105
           ||||||||||||||||||||||||||||||||||
Sbjct: 57  ttctggtttgccaaaggagatttgccctgccatt 90




>40741_mtr-MIR399k:mirbase
          Length = 94

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 79/94 (84%), Gaps = 4/94 (4%)
 Strand = Plus / Plus

                                                                       
Query: 16  aatgatagggaaaatctcttttggcagagaggag----taaaaatcttaaacaggaatgt 71
           |||||||||| |||||||||||||||||||||||    || | | ||| |||| |  || 
Sbjct: 1   aatgataggggaaatctcttttggcagagaggagtagctagagagcttgaacatgcttgc 60

                                             
Query: 72  ttctggtttgccaaaggagatttgccctgccatt 105
           |||| ||||||||||| |||||||||||||||||
Sbjct: 61  ttctagtttgccaaagaagatttgccctgccatt 94




>41063_ghr-MIR399d:mirbase
          Length = 98

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 78  tttgccaaaggagatttgccctgccatt 105
           ||||||||||||||||||||||||||||
Sbjct: 65  tttgccaaaggagatttgccctgccatt 92




>41453_ptc-MIR399f:mirbase
          Length = 101

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 71  tttctggtttgccaaaggagatttgccctgccatt 105
           |||||| |||||||||||||| |||||||||||||
Sbjct: 63  tttctgttttgccaaaggagaattgccctgccatt 97




>41675_vvi-MIR399h:mirbase
          Length = 90

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 72  ttctggtttgccaaaggagatttgccctgccatt 105
           ||||| |||||||||||||| |||||||||||||
Sbjct: 52  ttctgttttgccaaaggagaattgccctgccatt 85




>41152_tcc-MIR399g:mirbase
          Length = 112

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 72  ttctggtttgccaaaggagatttgccctgccatt 105
           ||||| |||||||||||||| |||||||||||||
Sbjct: 64  ttctgttttgccaaaggagaattgccctgccatt 97




>41250_csi-MIR399e:mirbase
          Length = 154

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 77  gtttgccaaaggagatttgccctgccatt 105
           ||||||||||||||| |||||||||||||
Sbjct: 15  gtttgccaaaggagaattgccctgccatt 43




>41248_csi-MIR399c:mirbase
          Length = 149

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 77  gtttgccaaaggagatttgccctgccatt 105
           ||||||||||||||| |||||||||||||
Sbjct: 106 gtttgccaaaggagaattgccctgccatt 134




>41151_tcc-MIR399f:mirbase
          Length = 111

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 78  tttgccaaaggagatttgccctgccatt 105
           ||||||| ||||||||||||||||||||
Sbjct: 69  tttgccagaggagatttgccctgccatt 96




>42819_zma-MIR399a:mirbase
          Length = 123

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 79  ttgccaaaggagatttgccctgccatt 105
           ||||||||||||| |||||||||||||
Sbjct: 83  ttgccaaaggagaattgccctgccatt 109




>41892_hvu-MIR399:mirbase
          Length = 131

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  ggtttgccaaaggagatttgccc 98
           |||||||||||||||||||||||
Sbjct: 98  ggtttgccaaaggagatttgccc 120



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 78 tttgccaaaggagatttgcc 97
          ||||||||||||||||||||
Sbjct: 19 tttgccaaaggagatttgcc 38




>41803_bdi-MIR399b:mirbase
          Length = 160

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 79  ttgccaaaggagatttgccctgccatt 105
           ||||||||||||| |||||||||||||
Sbjct: 109 ttgccaaaggagaattgccctgccatt 135




>42596_sbi-MIR399h:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 80  tgccaaaggagatttgccctgccatt 105
           |||||||||||| |||||||||||||
Sbjct: 93  tgccaaaggagaattgccctgccatt 118




>42042_osa-MIR399b:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 80  tgccaaaggagatttgccctgccatt 105
           |||||||||||| |||||||||||||
Sbjct: 67  tgccaaaggagaattgccctgccatt 92




>41454_ptc-MIR399g:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 80  tgccaaaggagatttgccctgccatt 105
           |||||||||||| |||||||||||||
Sbjct: 65  tgccaaaggagaattgccctgccatt 90




>41150_tcc-MIR399e:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gccaaaggagatttgccctgccatt 105
           ||||||||||| |||||||||||||
Sbjct: 78  gccaaaggagaattgccctgccatt 102




>40092_ath-MIR399a:mirbase
          Length = 123

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  tgccaaaggagatttgccctg 100
           |||||||||||||||||||||
Sbjct: 93  tgccaaaggagatttgccctg 113




>39889_aly-MIR399f:mirbase
          Length = 167

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  tgccaaaggagatttgccctg 100
           |||||||||||||||||||||
Sbjct: 112 tgccaaaggagatttgccctg 132




>42598_sbi-MIR399j:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 79  ttgccaaaggagatttgccctgcc 102
           ||||||||||||| ||||||||||
Sbjct: 70  ttgccaaaggagaattgccctgcc 93




>42041_osa-MIR399a:mirbase
          Length = 149

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 80  tgccaaaggagatttgccctgccatttt 107
           |||||||||||| ||||||||| |||||
Sbjct: 119 tgccaaaggagaattgccctgcgatttt 146




>39893_aly-MIR399j:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  ttgccaaaggagatttgccc 98
           ||||||||||||||||||||
Sbjct: 95  ttgccaaaggagatttgccc 114




>39891_aly-MIR399h:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  ttgccaaaggagatttgccc 98
           ||||||||||||||||||||
Sbjct: 81  ttgccaaaggagatttgccc 100