miRNEST 2.0, an integrative microRNA resource :: BLAST
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 182 bits (92), Expect = 3e-47
Identities = 102/104 (98%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 1 ttacagggtgagttctccattggcaggtagctagtcactatatgatatgcattgcaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 18 ttacagggtgagttctccattggcaggtagctagtcactatatgatatgcattgcaa-tc 76
Query: 61 atctcttagtgtgcaatctgccaaaggagatttgcccagcgatt 104
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atttcttagtgtgcaatctgccaaaggagatttgcccagcgatt 120
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 167 bits (84), Expect = 2e-42
Identities = 100/104 (96%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 1 ttacagggtgagttctccattggcaggtagctagtcactatatgatatgcattgcaattc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 18 ttacagggtgagttctccattggcaggtagctagccactatatgatatgcattgcaa-tc 76
Query: 61 atctcttagtgtgcaatctgccaaaggagatttgcccagcgatt 104
||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 77 atcacttagtgtgtaatctgccaaaggagatttgcccagcgatt 120
>42047_osa-MIR399g:mirbase
Length = 119
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 atctgccaaaggagatttgcccagcgatt 104
|||||||||||||||||||||||||||||
Sbjct: 86 atctgccaaaggagatttgcccagcgatt 114
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 68 agtgtgcaatctgccaaaggagatttgcccagc 100
|||||| || |||||||||||||||||||||||
Sbjct: 68 agtgtgtaacctgccaaaggagatttgcccagc 100
>40387_rco-MIR399e:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 68 agtgtgcaatctgccaaaggagatttgcccagc 100
||||||| ||||||||||||||||||||||||
Sbjct: 72 agtgtgccttctgccaaaggagatttgcccagc 104
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgcccagc 100
||||||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgcccagc 102
>42046_osa-MIR399f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgcccagc 100
||||||||||||||||||||||||
Sbjct: 85 tctgccaaaggagatttgcccagc 108
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagc 100
|||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagc 108
>42045_osa-MIR399e:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagc 100
|||||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagc 109
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 67 tagtgtgcaatctgccaaaggagatttgccc 97
|||||||| |||||||||||||||||||||
Sbjct: 70 tagtgtgccctctgccaaaggagatttgccc 100
>41246_csi-MIR399a:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 68 agtgtgcaatctgccaaaggagatttgccc 97
||||||| |||||||||||||||||||||
Sbjct: 103 agtgtgccttctgccaaaggagatttgccc 132
>40092_ath-MIR399a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 atctgccaaaggagatttgccc 97
||||||||||||||||||||||
Sbjct: 90 atctgccaaaggagatttgccc 111
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 94 tctgccaaaggagatttgccc 114
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40385_rco-MIR399c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 tgccaaaggagatttgcccagcgat 103
||||||||||||||||||| |||||
Sbjct: 71 tgccaaaggagatttgcccggcgat 95
>40299_bna-MIR399:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgccc 99
>40097_ath-MIR399f:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 86 tctgccaaaggagatttgccc 106
>40095_ath-MIR399d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 68 tctgccaaaggagatttgccc 88
>39889_aly-MIR399f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 110 tctgccaaaggagatttgccc 130
>39887_aly-MIR399d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 82 tctgccaaaggagatttgccc 102
>39884_aly-MIR399a:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgccc 97
|||||||||||||||||||||
Sbjct: 111 tctgccaaaggagatttgccc 131
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgcccagc 100
|||||||| |||||||||||||||
Sbjct: 99 tctgccaatggagatttgcccagc 122
>40388_rco-MIR399f:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 atctgccaaaggagatttgc 95
||||||||||||||||||||
Sbjct: 59 atctgccaaaggagatttgc 78
>40384_rco-MIR399b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>40096_ath-MIR399e:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgcc 96
||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcc 96
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
>39888_aly-MIR399e:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tctgccaaaggagatttgcc 96
||||||||||||||||||||
Sbjct: 116 tctgccaaaggagatttgcc 135
