miRNEST 2.0, an integrative microRNA resource :: BLAST
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 61.9 bits (31), Expect = 8e-11
Identities = 56/62 (90%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 39 tatgatatgcattgcaaccatactctttgagtgtgtaacctgccaaaggagatttgccca 98
||||||||||||||||| ||| | ||| ||||||||| |||||||||||||||||||||
Sbjct: 58 tatgatatgcattgcaatcat-cactt--agtgtgtaatctgccaaaggagatttgccca 114
Query: 99 gc 100
||
Sbjct: 115 gc 116
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 39 tatgatatgcattgcaaccatactctttgagtgtgtaacctgccaaaggagatttgccca 98
||||||||||||||||| ||| |||| |||||| || |||||||||||||||||||||
Sbjct: 58 tatgatatgcattgcaatcatt-tctt--agtgtgcaatctgccaaaggagatttgccca 114
Query: 99 gc 100
||
Sbjct: 115 gc 116
>40387_rco-MIR399e:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgcccagcaatt 108
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaat 103
||||||||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgcccagcaat 105
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaat 103
||||||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42046_osa-MIR399f:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaat 103
||||||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42045_osa-MIR399e:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaat 103
||||||||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 68 agtgtgtaacctgccaaaggagatttgcccagc 100
|||||| || |||||||||||||||||||||||
Sbjct: 68 agtgtgcaatctgccaaaggagatttgcccagc 100
>40384_rco-MIR399b:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 68 agtgtgtaacctgccaaaggagatttgcccagcaat 103
||||||| ||||||||||||||||||||| |||||
Sbjct: 70 agtgtgtgccctgccaaaggagatttgcccggcaat 105
>42047_osa-MIR399g:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagc 100
|||||||||||||||||||||||
Sbjct: 88 ctgccaaaggagatttgcccagc 110
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 81 ctgccaaaggagatttgcccggcaatt 107
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 90 ctgccaaaggagatttgccccgcaatt 116
>41246_csi-MIR399a:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 113 ctgccaaaggagatttgcccggcaatt 139
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 76 ctgccaaaggagatttgccccgcaatt 102
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 95 ctgccaaaggagatttgcccggcaatt 121
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
||||||| |||||||||||||||||||
Sbjct: 100 ctgccaatggagatttgcccagcaatt 126
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 94 ctgccaaaggagatttgcccggcaatt 120
>40095_ath-MIR399d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 69 ctgccaaaggagatttgccccgcaatt 95
>39892_aly-MIR399i:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 91 ctgccaaaggagatttgccccgcaatt 117
>39890_aly-MIR399g:mirbase
Length = 157
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 110 ctgccaaaggagatttgccccgcaatt 136
>39887_aly-MIR399d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaatt 104
|||||||||||||||||||| ||||||
Sbjct: 83 ctgccaaaggagatttgccccgcaatt 109
>42048_osa-MIR399h:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgcccagcaat 103
||||||||||||| ||||||||||||
Sbjct: 68 ctgccaaaggagacttgcccagcaat 93
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 tgccaaaggagatttgcccagcaatt 104
||||||||||||||||||| ||||||
Sbjct: 97 tgccaaaggagatttgcccggcaatt 122
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 tgccaaaggagatttgcccagcaatt 104
||||||||||||||||||| ||||||
Sbjct: 97 tgccaaaggagatttgcccggcaatt 122
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>40299_bna-MIR399:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>40097_ath-MIR399f:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
>40092_ath-MIR399a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 92 ctgccaaaggagatttgccc 111
>39889_aly-MIR399f:mirbase
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 111 ctgccaaaggagatttgccc 130
>39884_aly-MIR399a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ctgccaaaggagatttgccc 97
||||||||||||||||||||
Sbjct: 112 ctgccaaaggagatttgccc 131