miRNEST 2.0, an integrative microRNA resource :: BLAST
>40734_mtr-MIR399d:mirbase
Length = 129
Score = 190 bits (96), Expect = 1e-49
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 1 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 75
Query: 61 tctagaaattcacttgccaaaggagagctgccctacgagt 100
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 76 tctaaaaattcacttgccaaaggagagctgccctacgagt 115
>40732_mtr-MIR399b:mirbase
Length = 112
Score = 135 bits (68), Expect = 7e-33
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 3 tcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggctc 62
|||||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 1 tcatagggcatgtctctattggtaggtgatatggtgatatttcatttgaattagaggctt 60
Query: 63 tagaaattcacttgccaaaggagagctgccct 94
|||||||||||||||||||||||||||||||
Sbjct: 61 cagaaattcacttgccaaaggagagctgccct 92
>40745_mtr-MIR399o:mirbase
Length = 92
Score = 117 bits (59), Expect = 2e-27
Identities = 89/100 (89%), Gaps = 8/100 (8%)
Strand = Plus / Plus
Query: 1 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 60
|||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1 agtcatagggcatgtctctattggcaggtg--------atatttcatttgacttagaggc 52
Query: 61 tctagaaattcacttgccaaaggagagctgccctacgagt 100
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 53 tctagaaattcacttgccaaaggagagctgccctgcgagt 92
>40743_mtr-MIR399m:mirbase
Length = 85
Score = 81.8 bits (41), Expect = 9e-17
Identities = 79/95 (83%), Gaps = 15/95 (15%)
Strand = Plus / Plus
Query: 1 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 60
|||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 1 agtcatagggcatgtctctattggcaggtgatatagtgatat---------------ggc 45
Query: 61 tctagaaattcacttgccaaaggagagctgcccta 95
|||||||||||||||||||||||||||||||||||
Sbjct: 46 tctagaaattcacttgccaaaggagagctgcccta 80
>40386_rco-MIR399d:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 cttgccaaaggagagctgccct 94
||||||||||||||||||||||
Sbjct: 76 cttgccaaaggagagctgccct 97
>40094_ath-MIR399c:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 tcacttgccaaaggagagctgccct 94
|||||||||||||||||| ||||||
Sbjct: 79 tcacttgccaaaggagagttgccct 103
>39886_aly-MIR399c:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 tcacttgccaaaggagagctgccct 94
|||||||||||||||||| ||||||
Sbjct: 84 tcacttgccaaaggagagttgccct 108
>42822_zma-MIR399d:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccct 105
>42590_sbi-MIR399b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 82 tgccaaaggagagctgccct 101
>42049_osa-MIR399i:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccct 105
>40747_mtr-MIR399q:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 acttgccaaaggagagctgc 91
||||||||||||||||||||
Sbjct: 135 acttgccaaaggagagctgc 154
