miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40766_mtr-MIR2111i:mirbase
Length = 166
Score = 226 bits (114), Expect = 4e-60
Identities = 153/166 (92%)
Strand = Plus / Plus
Query: 1 ctgtgtctaagccttggaatgcagattatctcttccttatcaccaatgcaaaactgaaat 60
|||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ctgtatctaagccttagaatgcagattatctcttccttatcaccaatgcagaactgaaat 60
Query: 61 caacttgatagtttccattttctattagagctatatgtcgtcatgatggagtcggtagaa 120
| ||||||||||||||||||| | |||||| ||| |||| ||| ||| |||||||| ||
Sbjct: 61 aatcttgatagtttccattttccaatagagcaataggtcgccattatgtagtcggtataa 120
Query: 121 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
>40769_mtr-MIR2111l:mirbase
Length = 199
Score = 204 bits (103), Expect = 2e-53
Identities = 151/165 (91%), Gaps = 4/165 (2%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgcaaaact--gaaatcaa 63
|||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22 tctaagccttgggatgctgattatctcttccttatcaccaatgcaaaactatgaaatcaa 81
Query: 64 cttgata--gtttccattttctattagagctatatgtcgtcatgatggagtcggtagaaa 121
|||||| ||||||||||| |||||||| ||||||||||||||| || | ||||||||
Sbjct: 82 tttgatatagtttccattttacattagagcaatatgtcgtcatgatagaattggtagaaa 141
Query: 122 tattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 142 tattgggtaaggattagataatctgcatcctgaggtttaaagcaa 186
>40771_mtr-MIR2111n:mirbase
Length = 393
Score = 127 bits (64), Expect = 3e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 71 gtttccattttctattagagctatatgtcgtcatgatggagtcggtagaaatattgggta 130
|||||||||||| ||||||| ||| ||| || |||||||||||||| || |||||||||
Sbjct: 285 gtttccattttcctttagagcaataagtcttcttgatggagtcggtataattattgggta 344
Query: 131 aggattagataatctgcatcctgaggtttatagcaa 166
||||||||||||||||||||||||||||||||||||
Sbjct: 345 aggattagataatctgcatcctgaggtttatagcaa 380
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttcctta 39
||||||||||||| ||||||||||||||||||||
Sbjct: 20 tctaagccttggagtgcagattatctcttcctta 53
>40767_mtr-MIR2111j:mirbase
Length = 103
Score = 91.7 bits (46), Expect = 2e-19
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 121 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 46
>40760_mtr-MIR2111c:mirbase
Length = 106
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgc 49
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tctaagccttggaatgcagattatctcttccttatcaccaatgc 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 138 gataatctgcatcctgaggttta 160
|||||||||||||||||||||||
Sbjct: 18 gataatctgcatcctgaggttta 40
>40765_mtr-MIR2111h:mirbase
Length = 107
Score = 83.8 bits (42), Expect = 4e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1 ctgtgtctaagccttggaatgcagattatctcttccttatcaccaatgca 50
|||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 ctgtatctaagccttagaatgcagattatctcttccttatcaccaatgca 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 137 agataatctgcatcctgaggttta 160
||||||||||||||||||||||||
Sbjct: 17 agataatctgcatcctgaggttta 40
>40762_mtr-MIR2111e:mirbase
Length = 102
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 122 tattgggtaaggattagataatctgcatcctgaggtttata 162
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tattgggtaaggattagataatctgcatcctgaggtttata 42
>40768_mtr-MIR2111k:mirbase
Length = 106
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgc 49
|||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 63 tctaagccttgggatgctgattatctcttccttatcaccaatgc 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 133 gattagataatctgcatcctgaggttta 160
|||| |||||||||||||||||||||||
Sbjct: 13 gattggataatctgcatcctgaggttta 40
>40772_mtr-MIR2111o:mirbase
Length = 106
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatg 48
||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 63 tctaagccttggagtgcagattatctcttccttaacaccaatg 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 138 gataatctgcatcctgaggttta 160
|||||||||||||||||||||||
Sbjct: 18 gataatctgcatcctgaggttta 40
>40764_mtr-MIR2111g:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 119 aaatattgggtaaggattagataatctgcatcctgaggttta 160
|||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 123 aaatattgggtaaggattagataacctgcattctgaggttta 164
>40775_mtr-MIR2111r:mirbase
Length = 134
Score = 63.9 bits (32), Expect = 4e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgc 49
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 91 tctaagccttggagtgcagattatcttttccttatcacctatgc 134
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 121 atattgggtaaggattagataatctgcatcctgaggttta 160
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2 atattgggtgaggatgggataatctgcatcctgaggttta 41
>40774_mtr-MIR2111q:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 121 atattgggtaaggattagataatctgcatcctgaggttta 160
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 79 atattgggtgaggatgggataatctgcatcctgaggttta 118
>40770_mtr-MIR2111m:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 121 atattgggtaaggattagataatctgcatcctgaggttta 160
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1 atattgggtgaggatgggataatctgcatcctgaggttta 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgc 49
||||||||| ||| ||| |||||||| ||||| |||||||||||
Sbjct: 90 tctaagcctcggagtgcggattatcttttcct-atcaccaatgc 132
>40773_mtr-MIR2111p:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 123 attgggtaaggattagataatctgcatcctgaggtttatagcaa 166
||||| ||||||| | ||||||||||||||||||||| |||||
Sbjct: 4 attggttaaggatagggtaatctgcatcctgaggtttagagcaa 47
>40763_mtr-MIR2111f:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 121 atattgggtaaggattagataatctgcatcctgaggttta 160
||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 atattgggtggggatgggataatctgcatcctgaggttta 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 6 tctaagccttggaatgcagattatctcttccttatcaccaatgc 49
||||||||||||| || ||||||| | ||||||| || ||||||
Sbjct: 91 tctaagccttggattgtagattattttttccttaacatcaatgc 134
>40758_mtr-MIR2111a:mirbase
Length = 310
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 137 agataatctgcatcctgaggttta 160
||||||||||||||||||||||||
Sbjct: 286 agataatctgcatcctgaggttta 309
>40776_mtr-MIR2111s:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 122 tattgggtaaggattagataatctgcatcctgaggttta 160
|||||| ||||||| | |||||||||||||||||||||
Sbjct: 3 tattggttaaggatccggtaatctgcatcctgaggttta 41
>40761_mtr-MIR2111d:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 138 gataatctgcatcctgaggttta 160
|||||||||||||||||||||||
Sbjct: 111 gataatctgcatcctgaggttta 133
>41698_vvi-MIR2111:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 120 aatattgggtaaggattagataatctgcatcctgaggt 157
|||||||||| ||||| | ||||||||||||||||||
Sbjct: 3 aatattgggtcaggatcgggtaatctgcatcctgaggt 40
>40647_lja-MIR2111:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 aggattagataatctgcatcctgaggttta 160
||||| || |||||||||||||||||||||
Sbjct: 33 aggatcaggtaatctgcatcctgaggttta 62
>41161_tcc-MIR2111:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 21 taatctgcatcctgaggttta 41
>40328_bra-MIR2111b:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 14 taatctgcatcctgaggttta 34
>40327_bra-MIR2111a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 29 taatctgcatcctgaggttta 49
>40303_bna-MIR2111b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40302_bna-MIR2111a:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 27 taatctgcatcctgaggttta 47
>40215_ath-MIR2111b:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 45 taatctgcatcctgaggttta 65
>40214_ath-MIR2111a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 28 taatctgcatcctgaggttta 48
>39947_aly-MIR2111b:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>39946_aly-MIR2111a:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 taatctgcatcctgaggttta 160
|||||||||||||||||||||
Sbjct: 19 taatctgcatcctgaggttta 39
