miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40762_mtr-MIR2111e:mirbase
Length = 102
Score = 161 bits (81), Expect = 1e-40
Identities = 97/101 (96%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 2 tattgggtaaggattagataatctgcatcctgaggtttatagcaatattttagttgtctt 61
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 2 tattgggtaaggattagataatctgcatcctgaggtttataacaatattttagctgtctt 61
Query: 62 taatccttagaatgcagattatcctttccttaatgccaatg 102
||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 62 taa-ccttagaatgcagattatcctttccttattgccaatg 101
>40771_mtr-MIR2111n:mirbase
Length = 393
Score = 105 bits (53), Expect = 6e-24
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 2 tattgggtaaggattagataatctgcatcctgaggtttatagcaatattttagttgt 58
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 336 tattgggtaaggattagataatctgcatcctgaggtttatagcaatattgtagttgt 392
>40769_mtr-MIR2111l:mirbase
Length = 199
Score = 101 bits (51), Expect = 1e-22
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggtttatagcaatattttagttgtc 59
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 141 atattgggtaaggattagataatctgcatcctgaggtttaaagcaatattgtagttgtc 199
>40766_mtr-MIR2111i:mirbase
Length = 166
Score = 91.7 bits (46), Expect = 9e-20
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 66 ccttagaatgcagattatcctttcctta 93
||||||||||||||||||| |||||||
Sbjct: 12 ccttagaatgcagattatctcttcctta 39
>40759_mtr-MIR2111b:mirbase
Length = 166
Score = 91.7 bits (46), Expect = 9e-20
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atattgggtaaggattagataatctgcatcctgaggtttatagcaa 166
>40764_mtr-MIR2111g:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 3e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggtttatagcaatattttagt 55
|||||||||||||||||||||| |||||| |||||||||| | |||||||||||
Sbjct: 125 atattgggtaaggattagataacctgcattctgaggtttagtgtaatattttagt 179
>40775_mtr-MIR2111r:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggttta 40
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2 atattgggtgaggatgggataatctgcatcctgaggttta 41
>40774_mtr-MIR2111q:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggttta 40
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 79 atattgggtgaggatgggataatctgcatcctgaggttta 118
>40770_mtr-MIR2111m:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggttta 40
||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1 atattgggtgaggatgggataatctgcatcctgaggttta 40
>40773_mtr-MIR2111p:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 3 attgggtaaggattagataatctgcatcctgaggtttatagcaatattt 51
||||| ||||||| | ||||||||||||||||||||| ||||| ||||
Sbjct: 4 attggttaaggatagggtaatctgcatcctgaggtttagagcaacattt 52
>40768_mtr-MIR2111k:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 gattagataatctgcatcctgaggttta 40
|||| |||||||||||||||||||||||
Sbjct: 13 gattggataatctgcatcctgaggttta 40
>40765_mtr-MIR2111h:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 agataatctgcatcctgaggttta 40
||||||||||||||||||||||||
Sbjct: 17 agataatctgcatcctgaggttta 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 66 ccttagaatgcagattatcctttcctta 93
||||||||||||||||||| |||||||
Sbjct: 69 ccttagaatgcagattatctcttcctta 96
>40763_mtr-MIR2111f:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggttta 40
||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 atattgggtggggatgggataatctgcatcctgaggttta 40
>40758_mtr-MIR2111a:mirbase
Length = 310
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 agataatctgcatcctgaggttta 40
||||||||||||||||||||||||
Sbjct: 286 agataatctgcatcctgaggttta 309
>40647_lja-MIR2111:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 11 aggattagataatctgcatcctgaggtttatagcaatattttagttgtctttaatcctta 70
||||| || ||||||||||||||||||||| | ||||| || |||| | || ||||||
Sbjct: 33 aggatcaggtaatctgcatcctgaggtttaaaacaataggtttattgtgtctagtcctta 92
Query: 71 gaatgcagatta 82
| ||||||||||
Sbjct: 93 ggatgcagatta 104
>40776_mtr-MIR2111s:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2 tattgggtaaggattagataatctgcatcctgaggttta 40
|||||| ||||||| | |||||||||||||||||||||
Sbjct: 3 tattggttaaggatccggtaatctgcatcctgaggttta 41
>40772_mtr-MIR2111o:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gataatctgcatcctgaggttta 40
|||||||||||||||||||||||
Sbjct: 18 gataatctgcatcctgaggttta 40
>40761_mtr-MIR2111d:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gataatctgcatcctgaggttta 40
|||||||||||||||||||||||
Sbjct: 111 gataatctgcatcctgaggttta 133
>40760_mtr-MIR2111c:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gataatctgcatcctgaggttta 40
|||||||||||||||||||||||
Sbjct: 18 gataatctgcatcctgaggttta 40
>41698_vvi-MIR2111:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 atattgggtaaggattagataatctgcatcctgaggt 37
||||||||| ||||| | ||||||||||||||||||
Sbjct: 4 atattgggtcaggatcgggtaatctgcatcctgaggt 40
>41161_tcc-MIR2111:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 21 taatctgcatcctgaggttta 41
>40328_bra-MIR2111b:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 14 taatctgcatcctgaggttta 34
>40327_bra-MIR2111a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 29 taatctgcatcctgaggttta 49
>40303_bna-MIR2111b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40302_bna-MIR2111a:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 27 taatctgcatcctgaggttta 47
>40215_ath-MIR2111b:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 45 taatctgcatcctgaggttta 65
>40214_ath-MIR2111a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 28 taatctgcatcctgaggttta 48
>39947_aly-MIR2111b:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>39946_aly-MIR2111a:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 19 taatctgcatcctgaggttta 39
