miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40972_mtr-MIR2659c:mirbase
Length = 205
Score = 406 bits (205), Expect = e-114
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
Query: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaact 120
Query: 121 aatcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgactt 180
Query: 181 ggtaagattctacaagaagcagaag 205
|||||||||||||||||||||||||
Sbjct: 181 ggtaagattctacaagaagcagaag 205
>40975_mtr-MIR2659f:mirbase
Length = 205
Score = 375 bits (189), Expect = e-105
Identities = 201/205 (98%)
Strand = Plus / Plus
Query: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
Query: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaact 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtctattgaggaatgggagct 120
Query: 121 aatcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgactt 180
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 121 aatcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgactt 180
Query: 181 ggtaagattctacaagaagcagaag 205
|||||||||||||||||||||||||
Sbjct: 181 ggtaagattctacaagaagcagaag 205
>40973_mtr-MIR2659d:mirbase
Length = 205
Score = 375 bits (189), Expect = e-105
Identities = 201/205 (98%)
Strand = Plus / Plus
Query: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
Query: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaact 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 tatagatacttctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggagct 120
Query: 121 aatcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgactt 180
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 121 aatcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgactt 180
Query: 181 ggtaagattctacaagaagcagaag 205
|||||||||||||||||||||||||
Sbjct: 181 ggtaagattctacaagaagcagaag 205
>40970_mtr-MIR2659a:mirbase
Length = 205
Score = 375 bits (189), Expect = e-105
Identities = 201/205 (98%)
Strand = Plus / Plus
Query: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatgga 60
Query: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaact 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 61 tatagatactcctgcttatgaaatcaaaggaagaactatgtctattgaggaatgggagct 120
Query: 121 aatcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgactt 180
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 121 aatcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgactt 180
Query: 181 ggtaagattctacaagaagcagaag 205
|||||||||||||||||||||||||
Sbjct: 181 ggtaagattctacaagaagcagaag 205
>40974_mtr-MIR2659e:mirbase
Length = 203
Score = 329 bits (166), Expect = 5e-91
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
Query: 63 tagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaactaa 122
|||||||||| || |||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
Query: 123 tcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgacttgg 182
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
Query: 183 taagattctacaagaagcagaa 204
||||||||||||||||||||||
Sbjct: 182 taagattctacaagaagcagaa 203
