miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41308_ptc-MIR160d:mirbase
          Length = 103

 Score =  141 bits (71), Expect = 1e-34
 Identities = 96/102 (94%), Gaps = 3/102 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   atgggttatgcctggctccctgtatgccacaagcaaagaccaatctttt--gttttagat 60
           ||||||||||||||||||||||||||||||| |||||||||||||| ||  || ||||||
Sbjct: 3   atgggttatgcctggctccctgtatgccaca-gcaaagaccaatctcttctgtcttagat 61

                                                     
Query: 61  tggctgttgccggtggcgtgcgaggagccaagcatactctct 102
           |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62  tggctgctgccggtggcgtgcgaggagccaagcatactctct 103




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 58  gattggctgttgccggtggcgtgcgaggagccaagcatactctc 101
           |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 53  gattggctattgccggtggcgtgcgaggagccaagcatactctc 96




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 81/96 (84%), Gaps = 2/96 (2%)
 Strand = Plus / Plus

                                                                      
Query: 3  atgggttatgcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattg 62
          ||||||| ||||||||||||||||||||||| | | |||||| ||  || |    |||||
Sbjct: 3  atgggttgtgcctggctccctgtatgccacacgtagagaccactccctt-tcccggattg 61

                                              
Query: 63 gct-gttgccggtggcgtgcgaggagccaagcatac 97
          |||  |||| ||||||||||||||||||||||||||
Sbjct: 62 gctatttgcgggtggcgtgcgaggagccaagcatac 97




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 3  atgggttatgcctggctccctgtatgccac 32
          ||||| ||||||||||||||||||||||||
Sbjct: 14 atgggatatgcctggctccctgtatgccac 43



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  tggcgtgcgaggagccaagcat 95
           ||||||||||||||||||||||
Sbjct: 91  tggcgtgcgaggagccaagcat 112




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 3  atgggttatgcctggctccctgtatgccac 32
          ||||| ||||||||||||||||||||||||
Sbjct: 24 atgggatatgcctggctccctgtatgccac 53



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  tggcgtgcgaggagccaagcat 95
           ||||||||||||||||||||||
Sbjct: 122 tggcgtgcgaggagccaagcat 143




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  gttatgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||||
Sbjct: 1  gttatgcctggctccctgtatgccac 26




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  gttatgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||||
Sbjct: 20 gttatgcctggctccctgtatgccac 45



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 68  tgccggtggcgtgcgaggagccaagcat 95
           |||||||||||| | |||||||||||||
Sbjct: 77  tgccggtggcgtacaaggagccaagcat 104




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tgcctggctccctgtatgccacaag 35
          |||||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccacaag 29




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tgcctggctccctgtatgccacaag 35
          |||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacaag 45




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 atgcctggctccctgtatgccaca 33
          ||||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgccaca 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 72 ggtggcgtgcgaggagccaagcat 95
          |||||||||| |||||||||||||
Sbjct: 61 ggtggcgtgcaaggagccaagcat 84




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tatgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 7  tatgcctggctccctgtatgccac 30




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tatgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccac 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tatgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 6  tatgcctggctccctgtatgccac 29



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  tggcgtgcgaggagccaagcat 95
           ||||||||||||||||||||||
Sbjct: 117 tggcgtgcgaggagccaagcat 138




>41869_far-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 atgcctggctccctgtatgccaca 33
          ||||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccaca 75




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  ggtggcgtgcgaggagccaagcat 95
           |||||||||| |||||||||||||
Sbjct: 79  ggtggcgtgcaaggagccaagcat 102




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccaca 32




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgccaca 26



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 72 ggtggcgtgcgaggagccaagcat 95
          |||||||||| |||||||||||||
Sbjct: 63 ggtggcgtgcaaggagccaagcat 86




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  ggtggcgtgcgaggagccaagcat 95
           |||||||||| |||||||||||||
Sbjct: 92  ggtggcgtgcaaggagccaagcat 115




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  ggtggcgtgcgaggagccaagcat 95
           |||||||||| |||||||||||||
Sbjct: 90  ggtggcgtgcaaggagccaagcat 113




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgcca 40




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 2  tatgcctggctccctgtatgcca 24




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccaca 36




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tatgcctggctccctgtatgcc 30
          ||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 74  tggcgtgcgaggagccaagca 94
           |||||||||||||||||||||
Sbjct: 80  tggcgtgcgaggagccaagca 100




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tatgcctggctccctgtatgcc 30
          ||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcc 30




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  ggtggcgtgcgaggagccaagcat 95
           |||||||||| |||||||||||||
Sbjct: 89  ggtggcgtgcaaggagccaagcat 112




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39463_ppt-MIR160i:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 gcctggctccctgtatgccac 32
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40