miRNEST 2.0, an integrative microRNA resource :: BLAST
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 1 atattatatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggc 60
|||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 1 atattatatgtgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggc 60
Query: 61 ctccgtggatggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctccgtggatggcgtatgaggagccatgcatattc 95
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 135 bits (68), Expect = 7e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 6 atatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccg 65
|||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct: 6 atatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcg 65
Query: 66 tggatggcgtatgaggagccatgcatat 93
||||||||||||||||||||||||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatat 93
>41219_csi-MIR160:mirbase
Length = 143
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 7 tatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgt 66
|||||||||||||||||||||||||||||||||| | | || | ||||||||||||||
Sbjct: 29 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 88
Query: 67 ggatggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||||||||||
Sbjct: 89 ggatggcgtatgaggagccatgcatattc 117
>40019_ath-MIR160a:mirbase
Length = 85
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggat 70
|||||||||||||||||||||| ||| ||||||| || | |||||| |||||||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtggat 62
Query: 71 ggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||
Sbjct: 63 ggcgtatgaggagccatgcatat 85
>39807_aly-MIR160a:mirbase
Length = 158
Score = 85.7 bits (43), Expect = 5e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggat 70
|||||||||||||||||||||| ||| |||| || || | | ||||| |||||||||||
Sbjct: 42 tgcctggctccctgtatgccatatgctgagctcatcgagtat-cgatgacctccgtggat 100
Query: 71 ggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||
Sbjct: 101 ggcgtatgaggagccatgcatat 123
>40436_gma-MIR160:mirbase
Length = 119
Score = 79.8 bits (40), Expect = 3e-16
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 7 tatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgt 66
||||||||||||||||||||||||||||| ||||| || || | || ||| ||| ||
Sbjct: 17 tatgtgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgt 76
Query: 67 ggatggcgtatgaggagccatgcatatt 94
|||||||||||||||||||| |||||||
Sbjct: 77 ggatggcgtatgaggagccaagcatatt 104
>40312_bra-MIR160a:mirbase
Length = 127
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 55 gatggcctccgtggatggcgtatgaggagccatgcatatt 94
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgcatatt 108
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagccca 44
||||||||||||||||||||||||||| ||||||
Sbjct: 21 tgcctggctccctgtatgccatttgcaaagccca 54
>41529_sly-MIR160a:mirbase
Length = 129
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccg 47
||||||||||||||||||||||||||| ||| |||||
Sbjct: 20 tgcctggctccctgtatgccatttgcaaagctcaccg 56
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccacc 46
||||||||||||||||||||||||||| || |||||
Sbjct: 11 tgcctggctccctgtatgccatttgcaaagtccacc 46
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccatttgcagag 40
||||||||||||||||||||||||||| ||||
Sbjct: 4 tgtgcctggctccctgtatgccatttgtagag 35
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 65 gtggatggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||| ||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattc 90
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tatgtgcctggctccctgtatgccat 32
||||||||||||||||||||||||||
Sbjct: 2 tatgtgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 65 gtggatggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||| ||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattc 90
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tatgtgcctggctccctgtatgccat 32
||||||||||||||||||||||||||
Sbjct: 2 tatgtgcctggctccctgtatgccat 27
>40658_mtr-MIR160:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccatttgcagag 40
|||||||||||||||||||||||||| ||||
Sbjct: 20 gtgcctggctccctgtatgccatttgtagag 50
>40339_rco-MIR160a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccatttg 35
|||||||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgccatttg 30
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccatttgca 37
|||||||||||||||| ||||||||||||
Sbjct: 9 tgtgcctggctccctgcatgccatttgca 37
>42703_zma-MIR160c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atgtgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atgtgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 6 atgtgcctggctccctgtatgcca 29
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atgtgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atgtgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 28 atgtgcctggctccctgtatgcca 51
>42702_zma-MIR160b:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>41923_osa-MIR160a:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgcca 24
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgcca 34
>42701_zma-MIR160a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgcca 30
>41924_osa-MIR160b:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgcca 50
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgcca 51
>40020_ath-MIR160b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42707_zma-MIR160g:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>42705_zma-MIR160e:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41926_osa-MIR160d:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
>41869_far-MIR160:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgcca 73
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgcca 52
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgcca 44
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
