miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41310_ptc-MIR160f:mirbase
          Length = 100

 Score =  143 bits (72), Expect = 3e-35
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                      
Query: 1  aagaatggcctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aagaatggtctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60

                                              
Query: 61 acctttctatttggcatgaggggagtcgagcaggcc 96
          |||| ||||  ||||||||||||||||  |||||||
Sbjct: 61 acctctctaactggcatgaggggagtcacgcaggcc 96




>41574_vvi-MIR160b:mirbase
          Length = 104

 Score =  131 bits (66), Expect = 1e-31
 Identities = 81/86 (94%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
          |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||
Sbjct: 10 ctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttccta 69

                                    
Query: 70 tttggcatgaggggagtcgagcaggc 95
          |||||||||||||||||| |||||||
Sbjct: 70 tttggcatgaggggagtcaagcaggc 95




>40341_rco-MIR160c:mirbase
          Length = 94

 Score =  117 bits (59), Expect = 2e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
          |||||||||||||||||||||||||| ||||||||||||| |||||||||||  || |||
Sbjct: 5  ctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttccta 64

                                     
Query: 70 tttggcatgaggggagtcgagcaggcc 96
          ||||||||||||||||||  |||||||
Sbjct: 65 tttggcatgaggggagtcatgcaggcc 91




>41087_tcc-MIR160a:mirbase
          Length = 122

 Score = 99.6 bits (50), Expect = 4e-22
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
          |||||||||||||||||||||||||| |||||||||||||||||||||||  ||||  ||
Sbjct: 20 ctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgccttctta 79

                            
Query: 70 tttggcatgaggggagtc 87
            ||||||||||||||||
Sbjct: 80 catggcatgaggggagtc 97




>41165_aqc-MIR160a:mirbase
          Length = 83

 Score = 81.8 bits (41), Expect = 9e-17
 Identities = 69/77 (89%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttctat 70
          |||||||||||||| |||||||||| |||||||||| |||| ||||| || |||||||| 
Sbjct: 1  tgcctggctccctggatgccatctaagaagcttgtc-aagaatgttgacaccctttctag 59

                           
Query: 71 ttggcatgaggggagtc 87
          ||||||| |||||||||
Sbjct: 60 ttggcatcaggggagtc 76




>40660_mtr-MIR160c:mirbase
          Length = 92

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttctat 70
          ||||||||||||||||||||||||  ||||||||||||| |   ||||||||||||| ||
Sbjct: 6  tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64

                         
Query: 71 ttggcatgaggggag 85
          ||||||||| |||||
Sbjct: 65 ttggcatgaagggag 79




>41573_vvi-MIR160a:mirbase
          Length = 103

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaa 48
          |||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatctaagaagcttgtcaa 48




>41735_bdi-MIR160e:mirbase
          Length = 144

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  cctgcctggctccctgaatgccatct 34
          ||||||||||||||||||||||||||
Sbjct: 29 cctgcctggctccctgaatgccatct 54




>41928_osa-MIR160f:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ctgcctggctccctgaatgccatc 33
          ||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33




>42501_sbi-MIR160f:mirbase
          Length = 110

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgaatgccatc 33
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgaatgccatc 23




>40399_ahy-MIR160:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 ctgcctggctccctgaatgccat 32
          |||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42




>40398_ahy-MIR160:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 ctgcctggctccctgaatgccat 32
          |||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ctgcctggctccctgaatgccatct 34
          ||||||||||||||| |||||||||
Sbjct: 10 ctgcctggctccctgtatgccatct 34




>39461_ppt-MIR160g:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 9  cctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
          ||||||||||||| || |||||||||  |||||||| ||||
Sbjct: 28 cctgcctggctccttgtatgccatctgcgaagcttgacaaa 68




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ctgcctggctccctgaatgccatct 34
          ||||||||||||||| |||||||||
Sbjct: 19 ctgcctggctccctgtatgccatct 43




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
          |||||||||||||| ||||||| || ||||||
Sbjct: 6  tgcctggctccctgtatgccatatatgaagct 37




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
          |||||||||||||| ||||||| || ||||||
Sbjct: 6  tgcctggctccctgtatgccatatatgaagct 37