miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41309_ptc-MIR160e:mirbase
          Length = 100

 Score =  143 bits (72), Expect = 3e-35
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                      
Query: 1  aagaatggtctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aagaatggcctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60

                                              
Query: 61 acctctctaactggcatgaggggagtcacgcaggcc 96
          |||| ||||  ||||||||||||||||  |||||||
Sbjct: 61 acctttctatttggcatgaggggagtcgagcaggcc 96




>41574_vvi-MIR160b:mirbase
          Length = 104

 Score =  109 bits (55), Expect = 4e-25
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                      
Query: 9  tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
          ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||
Sbjct: 9  tctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcct 68

                                     
Query: 69 aactggcatgaggggagtcacgcaggc 95
          |  ||||||||||||||||| ||||||
Sbjct: 69 atttggcatgaggggagtcaagcaggc 95




>40341_rco-MIR160c:mirbase
          Length = 94

 Score =  105 bits (53), Expect = 6e-24
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                      
Query: 9  tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
          ||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |  ||
Sbjct: 4  tctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttcct 63

                                       
Query: 69 aactggcatgaggggagtcacgcaggccc 97
          |  ||||||||||||||||| ||||||||
Sbjct: 64 atttggcatgaggggagtcatgcaggccc 92




>41087_tcc-MIR160a:mirbase
          Length = 122

 Score =  103 bits (52), Expect = 2e-23
 Identities = 81/88 (92%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                       
Query: 9   tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
           ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||
Sbjct: 19  tctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgcct-tct 77

                                       
Query: 69  aac-tggcatgaggggagtcacgcaggc 95
            || ||||||||||||||||| ||||||
Sbjct: 78  tacatggcatgaggggagtcatgcaggc 105




>41165_aqc-MIR160a:mirbase
          Length = 83

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 73/83 (87%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctctaa 70
          |||||||||||||| |||||||||| |||||||||| |||| ||||| || ||| |||| 
Sbjct: 1  tgcctggctccctggatgccatctaagaagcttgtc-aagaatgttgacaccctttctag 59

                                 
Query: 71 ctggcatgaggggagtcacgcag 93
           |||||| |||||||||||||||
Sbjct: 60 ttggcatcaggggagtcacgcag 82




>41573_vvi-MIR160a:mirbase
          Length = 103

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 9  tctgcctggctccctgaatgccatctaggaagcttgtcaa 48
          ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9  tctgcctggctccctgaatgccatctaagaagcttgtcaa 48




>40660_mtr-MIR160c:mirbase
          Length = 92

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaa 49
          ||||||||||||||||||||||||  |||||||||||||
Sbjct: 6  tgcctggctccctgaatgccatctgagaagcttgtcaaa 44




>41735_bdi-MIR160e:mirbase
          Length = 144

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 ctgcctggctccctgaatgccatct 34
          |||||||||||||||||||||||||
Sbjct: 30 ctgcctggctccctgaatgccatct 54




>40399_ahy-MIR160:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  gtctgcctggctccctgaatgccat 32
          |||||||||||||||||||||||||
Sbjct: 18 gtctgcctggctccctgaatgccat 42



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  tggcatgaggggagtcacgcaggc 95
           |||||||| |||||||||||||||
Sbjct: 84  tggcatgaagggagtcacgcaggc 107




>40398_ahy-MIR160:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  gtctgcctggctccctgaatgccat 32
          |||||||||||||||||||||||||
Sbjct: 18 gtctgcctggctccctgaatgccat 42



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  tggcatgaggggagtcacgcaggc 95
           |||||||| |||||||||||||||
Sbjct: 84  tggcatgaagggagtcacgcaggc 107




>41928_osa-MIR160f:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ctgcctggctccctgaatgccatc 33
          ||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33




>42501_sbi-MIR160f:mirbase
          Length = 110

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tgcctggctccctgaatgccatc 33
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgaatgccatc 23




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 9  tctgcctggctccctgaatgccatct 34
          |||||||||||||||| |||||||||
Sbjct: 9  tctgcctggctccctgtatgccatct 34




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 9  tctgcctggctccctgaatgccatct 34
          |||||||||||||||| |||||||||
Sbjct: 18 tctgcctggctccctgtatgccatct 43




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
          |||||||||||||| ||||||| || ||||||
Sbjct: 6  tgcctggctccctgtatgccatatatgaagct 37




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
          |||||||||||||| ||||||| || ||||||
Sbjct: 6  tgcctggctccctgtatgccatatatgaagct 37




>39461_ppt-MIR160g:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                  
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
          |||||||||||| || |||||||||  |||||||| ||||
Sbjct: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68