miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41320_ptc-MIR164e:mirbase
          Length = 155

 Score =  167 bits (84), Expect = 3e-42
 Identities = 142/162 (87%), Gaps = 7/162 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcaagatggagaagcagggcacgtgcactactaactcatgcacacagagagggaga 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 1   gtgagcaagatggagaagcagggcacgtgcattactaactcatgcacacagagtgagaga 60

                                                                       
Query: 61  cgcatttcttgctggagttacgagttacgactcttacctactattgattttgttagctcc 120
             ||||||||||||       |||||| |||||||||||||||| |||| |||| ||| |
Sbjct: 61  gacatttcttgctg-------gagttatgactcttacctactatagattgtgttggcttc 113

                                                     
Query: 121 agtgagttagttattcatgtgcctgtcttcctcatcatgatc 162
           || ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 114 agcgagttagttcttcatgtgcctgtcttccccatcatgatc 155




>41581_vvi-MIR164c:mirbase
          Length = 97

 Score = 75.8 bits (38), Expect = 9e-15
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                        
Query: 2  tgagcaagatggagaagcagggcacgtgcactactaactcatgcac 47
          |||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcattactagctcatgcac 47




>40345_rco-MIR164c:mirbase
          Length = 116

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                   
Query: 6  caagatggagaagcagggcacgtgcactactaactcatgca 46
          |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcattactaactcatgca 41




>41278_ctr-MIR164:mirbase
          Length = 297

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 3  gagcaagatggagaagcagggcacgtgcactactaactca 42
          ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 14 gagcaagatggagaagcagggcacgtgcattactaactca 53




>41221_csi-MIR164:mirbase
          Length = 278

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 3  gagcaagatggagaagcagggcacgtgcactactaactca 42
          ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6  gagcaagatggagaagcagggcacgtgcattactaactca 45




>40665_mtr-MIR164b:mirbase
          Length = 144

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 6  caagatggagaagcagggcacgtgcactactaactcatg 44
          |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcaatactaactcatg 39




>40028_ath-MIR164b:mirbase
          Length = 153

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 9  gatggagaagcagggcacgtgcactactaactcat 43
          ||||||||||||||||||||||| ||||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35




>39817_aly-MIR164b:mirbase
          Length = 161

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 9  gatggagaagcagggcacgtgcactactaactcat 43
          ||||||||||||||||||||||| ||||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35




>41582_vvi-MIR164d:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  gatggagaagcagggcacgtgca 31
          |||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgca 31




>40029_ath-MIR164c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  gatggagaagcagggcacgtgc 30
          ||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgc 30




>39818_aly-MIR164c:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  gatggagaagcagggcacgtgc 30
          ||||||||||||||||||||||
Sbjct: 16 gatggagaagcagggcacgtgc 37




>42715_zma-MIR164g:mirbase
          Length = 171

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgca 22




>42712_zma-MIR164d:mirbase
          Length = 216

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgca 40




>42711_zma-MIR164c:mirbase
          Length = 270

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38




>42710_zma-MIR164b:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>42709_zma-MIR164a:mirbase
          Length = 152

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>42637_tae-MIR164:mirbase
          Length = 156

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>42507_sbi-MIR164e:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>42506_sbi-MIR164d:mirbase
          Length = 160

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgca 21




>42503_sbi-MIR164:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgca 21




>41936_osa-MIR164f:mirbase
          Length = 210

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44




>41932_osa-MIR164b:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 9  tggagaagcagggcacgtgca 29




>41931_osa-MIR164a:mirbase
          Length = 156

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgca 37




>41742_bdi-MIR164f:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 11  tggagaagcagggcacgtgca 31
           |||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgca 124




>41741_bdi-MIR164e:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>41740_bdi-MIR164d:mirbase
          Length = 186

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38




>41738_bdi-MIR164b:mirbase
          Length = 209

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgca 53




>41737_bdi-MIR164a:mirbase
          Length = 193

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgca 51




>41579_vvi-MIR164a:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41319_ptc-MIR164d:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41318_ptc-MIR164c:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41316_ptc-MIR164a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41092_tcc-MIR164b:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41091_tcc-MIR164a:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41047_ghr-MIR164:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>40666_mtr-MIR164c:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40664_mtr-MIR164a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40438_gma-MIR164:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>40344_rco-MIR164b:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40343_rco-MIR164a:mirbase
          Length = 78

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40313_bra-MIR164a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30




>40263_bna-MIR164:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 7  tggagaagcagggcacgtgca 27




>40027_ath-MIR164a:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>39816_aly-MIR164a:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>42714_zma-MIR164f:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgc 21




>42504_sbi-MIR164b:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40




>41934_osa-MIR164d:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30




>41739_bdi-MIR164c:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53