miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41317_ptc-MIR164b:mirbase
          Length = 162

 Score =  167 bits (84), Expect = 3e-42
 Identities = 142/162 (87%), Gaps = 7/162 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcaagatggagaagcagggcacgtgcattactaactcatgcacacagagtgagaga 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 1   gtgagcaagatggagaagcagggcacgtgcactactaactcatgcacacagagagggaga 60

                                                                       
Query: 61  gacatttcttgctg-------gagttatgactcttacctactatagattgtgttggcttc 113
             ||||||||||||       |||||| |||||||||||||||| |||| |||| ||| |
Sbjct: 61  cgcatttcttgctggagttacgagttacgactcttacctactattgattttgttagctcc 120

                                                     
Query: 114 agcgagttagttcttcatgtgcctgtcttccccatcatgatc 155
           || ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 121 agtgagttagttattcatgtgcctgtcttcctcatcatgatc 162




>41581_vvi-MIR164c:mirbase
          Length = 97

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                        
Query: 2  tgagcaagatggagaagcagggcacgtgcattactaactcatgcac 47
          |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcattactagctcatgcac 47




>40345_rco-MIR164c:mirbase
          Length = 116

 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 6  caagatggagaagcagggcacgtgcattactaactcatgca 46
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcattactaactcatgca 41



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 119 gttagttcttcatgtgcctgtcttccccatcatga 153
           |||||||||||||||||| ||||||||||||||||
Sbjct: 81  gttagttcttcatgtgcccgtcttccccatcatga 115




>41278_ctr-MIR164:mirbase
          Length = 297

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 3  gagcaagatggagaagcagggcacgtgcattactaactca 42
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gagcaagatggagaagcagggcacgtgcattactaactca 53



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 117 gagttagttcttcatgtgcctgtcttccccatcatga 153
           |||||| |||||||||||||  |||||||||||||||
Sbjct: 159 gagttatttcttcatgtgcccttcttccccatcatga 195




>41221_csi-MIR164:mirbase
          Length = 278

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 3  gagcaagatggagaagcagggcacgtgcattactaactca 42
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  gagcaagatggagaagcagggcacgtgcattactaactca 45



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 117 gagttagttcttcatgtgcctgtcttccccatcatga 153
           |||||| |||||||||||||  |||||||||||||||
Sbjct: 151 gagttatttcttcatgtgcccttcttccccatcatga 187




>40665_mtr-MIR164b:mirbase
          Length = 144

 Score = 69.9 bits (35), Expect = 5e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 6  caagatggagaagcagggcacgtgcattactaactcatg 44
          |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcaatactaactcatg 39



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 117 gagttagttcttcatgtgcctgtcttccccatcatga 153
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 108 gagttagttcttcatgtgcccctcttccccatcatga 144




>40028_ath-MIR164b:mirbase
          Length = 153

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 9  gatggagaagcagggcacgtgcattactaactcat 43
          ||||||||||||||||||||||||||||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 117 gagttagttcttcatgtgcctgtcttccccatc 149
           ||||||||||||||||||||  ||||| |||||
Sbjct: 121 gagttagttcttcatgtgcccatcttcaccatc 153




>39817_aly-MIR164b:mirbase
          Length = 161

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 9  gatggagaagcagggcacgtgcattactaactcat 43
          ||||||||||||||||||||||||||||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 117 gagttagttcttcatgtgcctgtcttccccatc 149
           ||||||||||||||||||||  ||||| |||||
Sbjct: 129 gagttagttcttcatgtgcccatcttcaccatc 161




>42710_zma-MIR164b:mirbase
          Length = 128

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tggagaagcagggcacgtgcattac 35
          |||||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcattac 45




>42503_sbi-MIR164:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tggagaagcagggcacgtgcattac 35
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>41932_osa-MIR164b:mirbase
          Length = 109

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tggagaagcagggcacgtgcattac 35
          |||||||||||||||||||||||||
Sbjct: 9  tggagaagcagggcacgtgcattac 33




>42711_zma-MIR164c:mirbase
          Length = 270

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tggagaagcagggcacgtgcatt 33
          |||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcatt 40




>41936_osa-MIR164f:mirbase
          Length = 210

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tggagaagcagggcacgtgcatt 33
          |||||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgcatt 46




>41742_bdi-MIR164f:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 11  tggagaagcagggcacgtgcatt 33
           |||||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgcatt 122




>41737_bdi-MIR164a:mirbase
          Length = 193

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tggagaagcagggcacgtgcatt 33
          |||||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgcatt 53




>41582_vvi-MIR164d:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  gatggagaagcagggcacgtgca 31
          |||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgca 31




>42712_zma-MIR164d:mirbase
          Length = 216

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgcat 41




>42709_zma-MIR164a:mirbase
          Length = 152

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcat 40




>42637_tae-MIR164:mirbase
          Length = 156

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgcat 24




>42506_sbi-MIR164d:mirbase
          Length = 160

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>41931_osa-MIR164a:mirbase
          Length = 156

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgcat 38




>41740_bdi-MIR164d:mirbase
          Length = 186

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcat 39




>41738_bdi-MIR164b:mirbase
          Length = 209

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tggagaagcagggcacgtgcat 32
          ||||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgcat 54




>40029_ath-MIR164c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  gatggagaagcagggcacgtgc 30
          ||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgc 30




>39818_aly-MIR164c:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  gatggagaagcagggcacgtgc 30
          ||||||||||||||||||||||
Sbjct: 16 gatggagaagcagggcacgtgc 37




>42715_zma-MIR164g:mirbase
          Length = 171

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgca 22




>42507_sbi-MIR164e:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>41741_bdi-MIR164e:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>41579_vvi-MIR164a:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41319_ptc-MIR164d:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41318_ptc-MIR164c:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41316_ptc-MIR164a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41092_tcc-MIR164b:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41091_tcc-MIR164a:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41047_ghr-MIR164:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>40666_mtr-MIR164c:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40664_mtr-MIR164a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40438_gma-MIR164:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>40344_rco-MIR164b:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40343_rco-MIR164a:mirbase
          Length = 78

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40313_bra-MIR164a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30




>40263_bna-MIR164:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 7  tggagaagcagggcacgtgca 27




>40027_ath-MIR164a:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>39816_aly-MIR164a:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tggagaagcagggcacgtgca 31
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>42714_zma-MIR164f:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgc 21




>42504_sbi-MIR164b:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40




>41934_osa-MIR164d:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30




>41739_bdi-MIR164c:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tggagaagcagggcacgtgc 30
          ||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53