miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 137 bits (69), Expect = 2e-33
Identities = 93/101 (92%)
Strand = Plus / Plus
Query: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattg 60
||||||||||||||||||||||||||||||||||||||||||||| | || | | | |
Sbjct: 9 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcg 68
Query: 61 taaaatacgatctcagattgagccgcgccaatatcactttc 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 taaaatacgatctcagattgagccgcgccaatatcactttc 109
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 133 bits (67), Expect = 3e-32
Identities = 90/95 (94%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 6 aaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaa 65
||||||||||||||||||||||||||||||||||||||||| || | || | ||||||||
Sbjct: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgt-atag-agttgtaaaa 58
Query: 66 tacgatctcagattgagccgcgccaatatcacttt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 59 tacgatctcagattgagccgcgccaatatcacttt 93
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 125 bits (63), Expect = 7e-30
Identities = 91/100 (91%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattg 60
||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacagatttacacg----agtgaaag 56
Query: 61 taaaatacgatctcagattgagccgcgccaatatcacttt 100
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 taaaatccgatctcagattgagccgcgccaatatcacttt 96
>40365_rco-MIR171g:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 6e-21
Identities = 82/93 (88%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaata 67
|||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacac----attctgttgtaaagga 56
Query: 68 cgatctcagattgagccgcgccaatatcacttt 100
|||||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcacttt 89
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 81.8 bits (41), Expect = 9e-17
Identities = 87/101 (86%), Gaps = 6/101 (5%)
Strand = Plus / Plus
Query: 2 aaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgt 61
|||| ||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttac----gaa--gagccgt 56
Query: 62 aaaatacgatctcagattgagccgcgccaatatcactttct 102
||| |||||||| |||||||||||||||||||||||||||
Sbjct: 57 aaagaacgatctctgattgagccgcgccaatatcactttct 97
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 1e-15
Identities = 83/98 (84%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 3 aagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgta 62
|||||||||||||||||||||||||||| ||||| |||||| | |||| ||||
Sbjct: 4 aagaaagcgatgttggtgaggttcaatctgaagattgatttatgcttgaa------tgta 57
Query: 63 aaatacgatctcagattgagccgcgccaatatcacttt 100
||| ||||||||||||||||||||||||||||||||
Sbjct: 58 aaaactgatctcagattgagccgcgccaatatcacttt 95
>41541_sly-MIR171d:mirbase
Length = 112
Score = 71.9 bits (36), Expect = 9e-14
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 7 aagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaat 66
|||||||||||||||||||||||||||||||| ||||| || | | |||||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaattta----tgcttattttcgtaaaga 63
Query: 67 acgatctcagattgagccgcgccaatatcactt 99
|||||||||||||||||||||||||||||||||
Sbjct: 64 acgatctcagattgagccgcgccaatatcactt 96
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 73 tcagattgagccgcgccaatatcactttct 102
||||||||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcactttct 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaaga 36
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 ctcagattgagccgcgccaatatcac 97
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 tcagattgagccgcgccaatatcac 97
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatcactt 99
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 71 tctcagattgagccgcgccaatatcac 97
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccga 33
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatcac 97
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatcac 97
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatcac 97
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgcgccaatatc 95
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 agattgagccgcgccaatatcact 98
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
