miRNEST 2.0, an integrative microRNA resource :: BLAST
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 10 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 69
||||||||| | ||||||||||| ||||| ||||||||||| || |||| ||||||||
Sbjct: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
Query: 70 gagccgtgccaatatc 85
||||||||||||||||
Sbjct: 73 gagccgtgccaatatc 88
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 23 gctcaatcaaatcaaagcactcaatggttgggttctttcatctgattgagccgtgccaat 82
|||||||||||| ||||| ||||| | |||||| |||| |||||||||||||||||||||
Sbjct: 13 gctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgagccgtgccaat 72
Query: 83 atc 85
|||
Sbjct: 73 atc 75
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 23 gctcaatcaaatcaaagcactcaatggtt--gggttctttcatctgattgagccgtgcca 80
|||||||||||||||| | | ||| |||| |||| |||| |||||||||||||||||||
Sbjct: 25 gctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgattgagccgtgcca 84
Query: 81 atatc 85
|||||
Sbjct: 85 atatc 89
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 60.0 bits (30), Expect = 3e-10
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 5 aaatttgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatc 64
|||||||||||||||| | |||||| |||||| | |||| ||| || || |||| ||
Sbjct: 15 aaatttgatgttggcacggttcaatcggatcaaatctctcagtggctgagtcctttagtc 74
Query: 65 tgattgagccgtgccaatatcgcatt 90
||||||||||||||||||||| ||||
Sbjct: 75 tgattgagccgtgccaatatcacatt 100
>40361_rco-MIR171c:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 54 gttctttcatctgattgagccgtgccaatatcgc 87
||||||| ||||||||||||||||||||||||||
Sbjct: 51 gttctttaatctgattgagccgtgccaatatcgc 84
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 catctgattgagccgtgccaatatcgca 88
||||||||||||||||||||||||||||
Sbjct: 110 catctgattgagccgtgccaatatcgca 137
>40363_rco-MIR171e:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 50 ttgggttctttcatctgattgagccgtgccaatatc 85
|||||| |||| ||||||||||||||||||||||||
Sbjct: 44 ttgggtcctttaatctgattgagccgtgccaatatc 79
>41874_far-MIR171:mirbase
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 atctgattgagccgtgccaatatcgca 88
|||||||||||||||||||||||||||
Sbjct: 87 atctgattgagccgtgccaatatcgca 113
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 gttgggttctttcatctgattgagccgtgccaatatc 85
||||||| ||| ||||||||||||||||||||||||
Sbjct: 55 gttgggtcgtttaatctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 gttgggttctttcatctgattgagccgtgccaatatc 85
||||||| ||| ||||||||||||||||||||||||
Sbjct: 55 gttgggtcttttaatctgattgagccgtgccaatatc 91
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 95 tctgattgagccgtgccaatatc 117
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tctgattgagccgtgccaatatc 85
|||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>40059_ath-MIR170:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tcatctgattgagccgtgccaatatc 85
|||||||||||||||||| |||||||
Sbjct: 54 tcatctgattgagccgtgtcaatatc 79
>39848_aly-MIR170:mirbase
Length = 212
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tcatctgattgagccgtgccaatatc 85
|||||||||||||||||| |||||||
Sbjct: 112 tcatctgattgagccgtgtcaatatc 137
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>42762_zma-MIR171b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatc 142
>41983_osa-MIR171c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>41982_osa-MIR171b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 100 tgattgagccgtgccaatatc 120
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>41216_crt-MIR171:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatc 181
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 21 tgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 84 tgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 121 tgattgagccgtgccaatatc 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>40364_rco-MIR171f:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 86 tgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 99 tgattgagccgtgccaatatc 119
>40360_rco-MIR171b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatc 83
>40359_rco-MIR171a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40289_bna-MIR171e:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40062_ath-MIR171c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>39851_aly-MIR171c:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
