miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41985_osa-MIR171e:mirbase
          Length = 119

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 99  tctgattgagccgtgccaatatcttagtgctc 130
           ||||||||||||||||||||||||||||||||
Sbjct: 87  tctgattgagccgtgccaatatcttagtgctc 118




>41890_hvu-MIR171:mirbase
          Length = 173

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 99  tctgattgagccgtgccaatatcttagtgctc 130
           ||||||||||||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatcttagtgctc 141




>42640_tae-MIR171a:mirbase
          Length = 130

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 98  ctctgattgagccgtgccaatatcttagtgctc 130
           ||||||||||||||||||||||||| |||||||
Sbjct: 86  ctctgattgagccgtgccaatatctcagtgctc 118




>42765_zma-MIR171e:mirbase
          Length = 126

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 99  tctgattgagccgtgccaatatcttagt 126
           ||||||||||||||||||||||||||||
Sbjct: 85  tctgattgagccgtgccaatatcttagt 112




>41123_tcc-MIR171h:mirbase
          Length = 135

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 99  tctgattgagccgtgccaatatcttag 125
           |||||||||||||||||||||||||||
Sbjct: 93  tctgattgagccgtgccaatatcttag 119




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 101 tgattgagccgtgccaatatcttagt 126
           ||||||||||||||||||||||||||
Sbjct: 99  tgattgagccgtgccaatatcttagt 124



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 11 gatgttggcccggttcactcagagaaaa 38
          ||||||||||||||||||||||| ||||
Sbjct: 4  gatgttggcccggttcactcagacaaaa 31




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 97  tctctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||||
Sbjct: 86  tctctgattgagccgtgccaatatc 110




>42554_sbi-MIR171i:mirbase
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 99  tctgattgagccgtgccaatatctt 123
           |||||||||||||||||||||||||
Sbjct: 66  tctgattgagccgtgccaatatctt 90




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 97  tctctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||||
Sbjct: 89  tctctgattgagccgtgccaatatc 113




>42764_zma-MIR171d:mirbase
          Length = 121

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 99  tctgattgagccgtgccaatatct 122
           ||||||||||||||||||||||||
Sbjct: 80  tctgattgagccgtgccaatatct 103




>42549_sbi-MIR171d:mirbase
          Length = 153

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 99  tctgattgagccgtgccaatatct 122
           ||||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatct 135




>41984_osa-MIR171d:mirbase
          Length = 135

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 99  tctgattgagccgtgccaatatct 122
           ||||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatct 126




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 101 tgattgagccgtgccaatatcttagtgc 128
           ||||||||||||||||||||| ||||||
Sbjct: 121 tgattgagccgtgccaatatcctagtgc 148



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 10 cgatgttggcccggttcactcagagaaaa 38
          |||||||||| ||||||||||||| ||||
Sbjct: 20 cgatgttggctcggttcactcagacaaaa 48




>40322_bra-MIR171e:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 99  tctgattgagccgtgccaatatcttagtgctc 130
           ||||||||||||| |||||||||| |||||||
Sbjct: 82  tctgattgagccgcgccaatatctcagtgctc 113




>40290_bna-MIR171f:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 99  tctgattgagccgtgccaatatcttagtgctc 130
           ||||||||||||| |||||||||| |||||||
Sbjct: 82  tctgattgagccgcgccaatatctcagtgctc 113




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 95  tctgattgagccgtgccaatatc 117




>41874_far-MIR171:mirbase
          Length = 130

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 88  tctgattgagccgtgccaatatc 110




>41765_bdi-MIR171b:mirbase
          Length = 164

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134




>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 67  tctgattgagccgtgccaatatc 89




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 66  tctgattgagccgtgccaatatc 88




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 69  tctgattgagccgtgccaatatc 91




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 69  tctgattgagccgtgccaatatc 91




>41385_ptc-MIR171e:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 63  tctgattgagccgtgccaatatc 85




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 101 tgattgagccgtgccaatatctt 123
           |||||||||||||||||||||||
Sbjct: 84  tgattgagccgtgccaatatctt 106




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 53  tctgattgagccgtgccaatatc 75




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 101 tgattgagccgtgccaatatctt 123
           |||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatctt 102




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 73  tctgattgagccgtgccaatatc 95




>40363_rco-MIR171e:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 57  tctgattgagccgtgccaatatc 79




>40361_rco-MIR171c:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  tctgattgagccgtgccaatatc 121
           |||||||||||||||||||||||
Sbjct: 60  tctgattgagccgtgccaatatc 82




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 tgattgagccgtgccaatatct 122
           ||||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatct 108




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 tgattgagccgtgccaatatct 122
           ||||||||||||||||||||||
Sbjct: 100 tgattgagccgtgccaatatct 121




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 tgattgagccgtgccaatatct 122
           ||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatct 101




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 tgattgagccgtgccaatatct 122
           ||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatct 101




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 tgattgagccgtgccaatatct 122
           ||||||||||||||||||||||
Sbjct: 86  tgattgagccgtgccaatatct 107




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 65  tgattgagccgtgccaatatc 85




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 62  tgattgagccgtgccaatatc 82




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 62  tgattgagccgtgccaatatc 82




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatc 142




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 69  tgattgagccgtgccaatatc 89




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 70  tgattgagccgtgccaatatc 90




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 64  tgattgagccgtgccaatatc 84




>41626_vvi-MIR171e:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 97  tctctgattgagccgtgccaatatc 121
           ||||||||||||||| |||||||||
Sbjct: 66  tctctgattgagccgcgccaatatc 90




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 67  tgattgagccgtgccaatatc 87




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 70  tgattgagccgtgccaatatc 90




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 71  tgattgagccgtgccaatatc 91




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 72  tgattgagccgtgccaatatc 92




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatc 181




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 21  tgattgagccgtgccaatatc 1




>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 77  tgattgagccgtgccaatatc 97




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 77  tgattgagccgtgccaatatc 97




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 67  tgattgagccgtgccaatatc 87




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 72  tgattgagccgtgccaatatc 92




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 63  tgattgagccgtgccaatatc 83




>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 64  tgattgagccgtgccaatatc 84




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 62  tgattgagccgtgccaatatc 82




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatc 88




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 67  tgattgagccgtgccaatatc 87




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatc 88




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 tgattgagccgtgccaatatc 121
           |||||||||||||||||||||
Sbjct: 74  tgattgagccgtgccaatatc 94