miRNEST 2.0, an integrative microRNA resource :: BLAST
>41394_ptc-MIR171n:mirbase
Length = 101
Score = 184 bits (93), Expect = 8e-48
Identities = 99/101 (98%)
Strand = Plus / Plus
Query: 1 gaagcagacatggcgtggtattgatccggctcatcttctgtatttgcatcagaagttctt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 1 gaagcagacatggcgtggtattgatccggctcttcttctgtatttgcatcagaagttttt 60
Query: 61 cgctgaagacgagccgaatcaatatcactcttgtacgcttc 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgaagacgagccgaatcaatatcactcttgtacgcttc 101
>41392_ptc-MIR171l:mirbase
Length = 112
Score = 81.8 bits (41), Expect = 9e-17
Identities = 91/106 (85%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 1 gaagcagacatggcgtggtattgatccggctcatcttctgt--atttgcatcagaagttc 58
|||| ||||| || ||| ||||| ||||||||||||||||| || ||||| |||||||
Sbjct: 4 gaagtagacacggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttc 63
Query: 59 ttcgct---gaagacgagccgaatcaatatcactcttgtacgcttc 101
||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 64 ttcactcatgaagacgagccgaatcaatatcactcttgtatgcttc 109
>41499_ptc-MIR479:mirbase
Length = 85
Score = 65.9 bits (33), Expect = 5e-12
Identities = 68/78 (87%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 19 tattgatccggctcatcttctgt--atttgcatcagaagttcttcgct---gaagacgag 73
||||| ||||||||||||||||| || ||||| |||||||||| || |||||||||
Sbjct: 8 tattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatgaagacgag 67
Query: 74 ccgaatcaatatcactct 91
||||||||||||||||||
Sbjct: 68 ccgaatcaatatcactct 85
>41258_csi-MIR479:mirbase
Length = 147
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 67 agacgagccgaatcaatatcactcttgtacgcttc 101
||||||||||||||||||||||||||||| |||||
Sbjct: 94 agacgagccgaatcaatatcactcttgtatgcttc 128
>41232_csi-MIR171b:mirbase
Length = 165
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 67 agacgagccgaatcaatatcactcttgtacgcttc 101
||||||||||||||||||||||||||||| |||||
Sbjct: 119 agacgagccgaatcaatatcactcttgtatgcttc 153
>41686_vvi-MIR479:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 66 aagacgagccgaatcaatatcactcttgtacgcttc 101
||||||||||||| |||||||||||||||| |||||
Sbjct: 59 aagacgagccgaaccaatatcactcttgtatgcttc 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 agacatggcgtggtattgatccggctcatcttct 39
|||||||| ||||||||| | |||||||||||||
Sbjct: 3 agacatggtgtggtattggttcggctcatcttct 36
>40456_gma-MIR171b:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 agacgagccgaatcaatatcactcttgt 94
||||||||||||||||||||||||||||
Sbjct: 59 agacgagccgaatcaatatcactcttgt 86
>40455_gma-MIR171b:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 agacgagccgaatcaatatcactcttgt 94
||||||||||||||||||||||||||||
Sbjct: 59 agacgagccgaatcaatatcactcttgt 86
>41064_ghr-MIR479:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 70 cgagccgaatcaatatcactcttgtacgctt 100
||||||||||||||||||||| |||| ||||
Sbjct: 63 cgagccgaatcaatatcactcatgtatgctt 93
>42771_zma-MIR171k:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 gacatggcgtggtattgatccggctcat 34
||||||||||||||||| | ||||||||
Sbjct: 15 gacatggcgtggtattgtttcggctcat 42
>42768_zma-MIR171h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 gacatggcgtggtattgatccggctcat 34
||||||||||||||||| | ||||||||
Sbjct: 15 gacatggcgtggtattgtttcggctcat 42
>42550_sbi-MIR171e:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 gacatggcgtggtattgatccggctcat 34
||||||||||||||||| | ||||||||
Sbjct: 15 gacatggcgtggtattgtttcggctcat 42
