miRNEST 2.0, an integrative microRNA resource :: BLAST
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 117 bits (59), Expect = 2e-27
Identities = 86/94 (91%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaacccagcatcagctaaag--actctttgcttttct 64
||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||| |
Sbjct: 17 atgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgt 76
Query: 65 tgggagtgtgctctctcttcttctgtcatcatca 98
|||||||||||| ||||||||||||||| |||||
Sbjct: 77 tgggagtgtgctttctcttcttctgtcaccatca 110
>40334_rco-MIR156e:mirbase
Length = 95
Score = 115 bits (58), Expect = 6e-27
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaacccagcatcag-ctaaagactctttgcttttctt 65
||||||||||||||||| ||||||||||| |||| || ||||||| ||||||| ||| ||
Sbjct: 2 atgttgacagaagagagagagcacaacccggcattaggctaaagagtctttgcctttgtt 61
Query: 66 gggagtgtgctctctcttcttctgtcatcatcac 99
|||||||||||||||| |||||||||||||||||
Sbjct: 62 gggagtgtgctctctcctcttctgtcatcatcac 95
>41204_aqc-MIR529:mirbase
Length = 125
Score = 107 bits (54), Expect = 2e-24
Identities = 87/97 (89%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 5 atatgttgacagaagagagggagcacaacccagcatcagctaa--agactctttgctttt 62
||||||||||||||||||| |||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 12 atatgttgacagaagagagagagcacaacccatcatcagctaaagagagtcttttctttt 71
Query: 63 cttgggagtgtgctctctcttcttctgtcatcatcac 99
||||||||||||||| | |||||||||||||||||
Sbjct: 72 gttgggagtgtgctctttgctcttctgtcatcatcac 108
>40430_gma-MIR156f:mirbase
Length = 106
Score = 85.7 bits (43), Expect = 6e-18
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaacccagcatcagctaaag-actctttgcttttctt 65
||||||||||||||||| ||||||||||| | | | ||||| | ||||||| ||| ||
Sbjct: 8 atgttgacagaagagagagagcacaacccgggaatggttaaaggagtctttgcctttgtt 67
Query: 66 gggagtgtgctctctcttcttctgtcatcatcaca 100
||||||||||||||||||| |||||||||||||||
Sbjct: 68 gggagtgtgctctctcttcctctgtcatcatcaca 102
>40426_gma-MIR156b:mirbase
Length = 120
Score = 85.7 bits (43), Expect = 6e-18
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaacccagcatcagctaaag-actctttgcttttctt 65
||||||||||||||||| ||||||||||| | | ||||||| | ||||||| ||| ||
Sbjct: 17 atgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgtt 76
Query: 66 gggagtgtgctctctcttcttctgtcatcatcaca 100
|||||||||| |||||||| |||||||||||||||
Sbjct: 77 gggagtgtgccctctcttcctctgtcatcatcaca 111
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 5e-12
Identities = 73/84 (86%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 11 tgacagaagagagggagcacaacccagcatcagctaa--agactctttgcttttcttggg 68
||||||||||||||||||||||||| | | |||||| ||| ||||||||||| || ||
Sbjct: 11 tgacagaagagagggagcacaaccctgtaatagctaaagagagtctttgcttttgtt-gg 69
Query: 69 agtgtgctctctcttcttctgtca 92
| |||||| |||||||||||||||
Sbjct: 70 actgtgctttctcttcttctgtca 93
>42687_zma-MIR156j:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 tgacagaagagagggagcacaacccagcatcagc 44
||||||||||||| ||||||||||||||| ||||
Sbjct: 21 tgacagaagagagagagcacaacccagcaccagc 54
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 tgacagaagagagggagcacaacccagcatcagc 44
||||||||||||| ||||||||||||||| ||||
Sbjct: 21 tgacagaagagagagagcacaacccagcaccagc 54
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 64 ttgggagtgtgctctctcttcttctgtcatcatc 97
||||||||||||||||| |||||||||||||||
Sbjct: 77 ttgggagtgtgctctctactcttctgtcatcatc 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaaccc 35
||||||||||||||||| |||||||||||
Sbjct: 18 atgttgacagaagagagagagcacaaccc 46
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 64 ttgggagtgtgctctctcttcttctgtcatcatc 97
||||||||||||||||| |||||||||||||||
Sbjct: 73 ttgggagtgtgctctctactcttctgtcatcatc 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaaccc 35
||||||||||||||||| |||||||||||
Sbjct: 14 atgttgacagaagagagagagcacaaccc 42
>41914_osa-MIR156k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 tgacagaagagagggagcacaacccagcatcagc 44
||||||||||||| ||||||||||| ||| ||||
Sbjct: 11 tgacagaagagagagagcacaacccggcagcagc 44
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgtgctctctcttcttctgtcatca 95
|||||||||| ||||||||||||||
Sbjct: 69 tgtgctctctattcttctgtcatca 93
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgtgctctctcttcttctgtcatca 95
|||||||||| ||||||||||||||
Sbjct: 79 tgtgctctctattcttctgtcatca 103
>40336_rco-MIR156g:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 tgtgctctctcttcttctgtcatcatcac 99
|||||||||| |||||||||||||||||
Sbjct: 68 tgtgctctctagtcttctgtcatcatcac 96
>40009_ath-MIR156h:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 2 gaaatatgttgacagaagagagggagcacaacc 34
|||| |||||||||||||| || ||||||||||
Sbjct: 3 gaaaaatgttgacagaagaaagagagcacaacc 35
>41913_osa-MIR156j:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tgttgacagaagagagggagcaca 31
|||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62
>41911_osa-MIR156h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tgttgacagaagagagggagcaca 31
|||||||||||||||| |||||||
Sbjct: 6 tgttgacagaagagagtgagcaca 29
>39797_aly-MIR156h:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 atgttgacagaagagagggagcacaacc 34
|||||||||||||| || ||||||||||
Sbjct: 4 atgttgacagaagaaagagagcacaacc 31
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gtgctctctcttcttctgtcatca 95
||||||||| ||||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
