miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41571_vvi-MIR159b:mirbase
          Length = 185

 Score =  107 bits (54), Expect = 3e-24
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                       
Query: 58  ctgctggttcatgagtacctatggctgcacaatatatatagcaatgttgtgtgcaaacta 117
           ||||||||||||||  |||||||||||||   | ||||  | ||| |||| | |||||||
Sbjct: 48  ctgctggttcatgaaaacctatggctgcattctctatactgaaattttgtatacaaacta 107

                                                                       
Query: 118 tgggtgtgcatgacctcggagaagtggttgccttgatcttt-ctggccttggagtgaagg 176
           ||||| ||||||| || ||||||||| |||| || |||||| ||||||||||||||||||
Sbjct: 108 tgggtttgcatgaacttggagaagtgtttgcttttatcttttctggccttggagtgaagg 167

                         
Query: 177 gagctctcataacc 190
           ||||||||||||||
Sbjct: 168 gagctctcataacc 181




>41303_ptc-MIR159e:mirbase
          Length = 192

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 135 ggagaagtggttgccttgatctttctggccttggagtgaagggagctc 182
           ||||| |||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 134 ggagatgtggttgccttgatctttttggtcttggggtgaagggagctc 181




>41304_ptc-MIR159f:mirbase
          Length = 201

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178
           |||| |||||||||| ||||| |||||| || ||| | || | |  ||||||||||||||
Sbjct: 128 gggtctgcatgacctaggagacgtggttaccctgaccctttttgtattggagtgaaggga 187

               
Query: 179 gctc 182
           ||||
Sbjct: 188 gctc 191




>40433_gma-MIR159b:mirbase
          Length = 186

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178
           |||| |||||| ||| ||||| | | || ||||||||||| |||  ||||||||||||||
Sbjct: 112 gggtttgcatgccctgggagatgagtttaccttgatcttt-tggtattggagtgaaggga 170

               
Query: 179 gctc 182
           ||||
Sbjct: 171 gctc 174