miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 131 bits (66), Expect = 2e-31
Identities = 152/178 (85%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 66 tggatcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatat 125
|||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 61 tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120
Query: 126 ctcaggagctgcattatccaagt-ttagatccttgtttggattgaagggagctctaca 182
|||||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaggagcttcatta-ccttgtattagatccttgtttggattgaagggagctctaca 177
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 105 bits (53), Expect = 1e-23
Identities = 153/184 (83%), Gaps = 8/184 (4%)
Strand = Plus / Plus
Query: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||
Sbjct: 6 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 65
Query: 64 tatggatcccacagccctatc-ccgtcaatggggggca-ttggataggcttgtggcttgc 121
|||| |||||||||||||||| || ||| | || || ||| ||| || |||||||
Sbjct: 66 tatgaatcccacagccctatcaccatca------gtcattttgatgggcctgcggcttgc 119
Query: 122 atatctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctctac 181
|||||||||||||| |||| | || ||||||| || |||||||||||||||||||||
Sbjct: 120 atatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaa 179
Query: 182 acct 185
||||
Sbjct: 180 acct 183
>40397_ahy-MIR159:mirbase
Length = 197
Score = 93.7 bits (47), Expect = 5e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
|||||||||||||||||||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 67 ggatcccacag 77
|||||||||||
Sbjct: 61 ggatcccacag 71
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 151 agatccttgtttggattgaagggagctctaca 182
|||||||| |||||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctctaca 179
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 68 gatcccacag 77
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctctac 181
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 68 gatcccacag 77
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctctac 181
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 5 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 65 atggatcc 72
||||||||
Sbjct: 67 atggatcc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 5 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 65 atggatcc 72
||||||||
Sbjct: 67 atggatcc 74
>40432_gma-MIR159a:mirbase
Length = 214
Score = 85.7 bits (43), Expect = 1e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
||||||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 67 ggatcccacag 77
|||||||||||
Sbjct: 79 ggatcccacag 89
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 155 ccttgtttggattgaagggagctctacacc 184
|||| |||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctacacc 199
>41218_csi-MIR159:mirbase
Length = 216
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 5 ggagtggagctccttgaagtccaatagagggtcttac-tgggtagattgagctgctgact 63
|||||||||||||||||||||||| ||||| ||| | ||||| |||||||||||||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 64 tatggatcccacagccctat 83
|||||||||||||| |||||
Sbjct: 68 tatggatcccacagtcctat 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gataggcttgtggcttgcatat 125
||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctac 181
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>41922_osa-MIR159f:mirbase
Length = 188
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 161 ttggattgaagggagctctacacctctctc 190
||||||||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacctctctc 188
>41528_sly-MIR159:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 1e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
|||||||||||||||||||| | | ||| || || || |||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 69 atcccacagccctatc 84
|| || ||||||||||
Sbjct: 61 attcctcagccctatc 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctaca 182
|||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctaca 182
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctaca 182
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctaca 182
|||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 tggcttgcatatctcaggagct 135
||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagct 151
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41919_osa-MIR159c:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 161 ttggattgaagggagctctacacctctctc 190
|||||||||||||||||| ||| |||||||
Sbjct: 168 ttggattgaagggagctccacatctctctc 197
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctctac 181
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184