miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40338_rco-MIR159:mirbase
          Length = 180

 Score =  131 bits (66), Expect = 2e-31
 Identities = 152/178 (85%), Gaps = 2/178 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
           ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||  ||
Sbjct: 1   gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60

                                                                       
Query: 66  tggatcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatat 125
           ||||||||||||||||||      |          |||||||||||||||||||||||||
Sbjct: 61  tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120

                                                                     
Query: 126 ctcaggagctgcattatccaagt-ttagatccttgtttggattgaagggagctctaca 182
           |||||||||| ||||| ||  || ||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaggagcttcatta-ccttgtattagatccttgtttggattgaagggagctctaca 177




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score =  105 bits (53), Expect = 1e-23
 Identities = 153/184 (83%), Gaps = 8/184 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
           ||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||  
Sbjct: 6   tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 65

                                                                       
Query: 64  tatggatcccacagccctatc-ccgtcaatggggggca-ttggataggcttgtggcttgc 121
           |||| |||||||||||||||| || |||      | || || ||| ||| || |||||||
Sbjct: 66  tatgaatcccacagccctatcaccatca------gtcattttgatgggcctgcggcttgc 119

                                                                       
Query: 122 atatctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctctac 181
           ||||||||||||||  |||| | ||  ||||||| || ||||||||||||||||||||| 
Sbjct: 120 atatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaa 179

               
Query: 182 acct 185
           ||||
Sbjct: 180 acct 183




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 93.7 bits (47), Expect = 5e-20
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                      
Query: 7  agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
          |||||||||||||||||||||| ||||||||||  |||||||||||||||||| |  |||
Sbjct: 1  agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60

                     
Query: 67 ggatcccacag 77
          |||||||||||
Sbjct: 61 ggatcccacag 71



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 151 agatccttgtttggattgaagggagctctaca 182
           |||||||| |||||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctctaca 179




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 8  gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
          |||||||||||||||||||||| |||| ||||||||||| |||||||||||| |  ||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                    
Query: 68 gatcccacag 77
          ||||||||||
Sbjct: 61 gatcccacag 70



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 153 atccttgtttggattgaagggagctctac 181
           |||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 8  gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
          |||||||||||||||||||||| |||| ||||||||||| |||||||||||| |  ||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                    
Query: 68 gatcccacag 77
          ||||||||||
Sbjct: 61 gatcccacag 70



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 153 atccttgtttggattgaagggagctctac 181
           |||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5  ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
          |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |  |
Sbjct: 7  ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66

                  
Query: 65 atggatcc 72
          ||||||||
Sbjct: 67 atggatcc 74




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5  ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
          |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |  |
Sbjct: 7  ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66

                  
Query: 65 atggatcc 72
          ||||||||
Sbjct: 67 atggatcc 74




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 85.7 bits (43), Expect = 1e-17
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                      
Query: 7  agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
          ||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |  |||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78

                     
Query: 67 ggatcccacag 77
          |||||||||||
Sbjct: 79 ggatcccacag 89



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 155 ccttgtttggattgaagggagctctacacc 184
           |||| |||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctacacc 199




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 5  ggagtggagctccttgaagtccaatagagggtcttac-tgggtagattgagctgctgact 63
          |||||||||||||||||||||||| ||||| |||  |  ||||| |||||||||||||  
Sbjct: 8  ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67

                              
Query: 64 tatggatcccacagccctat 83
          |||||||||||||| |||||
Sbjct: 68 tatggatcccacagtcctat 87



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 gataggcttgtggcttgcatat 125
           ||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 tttggattgaagggagctctac 181
           ||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207




>41922_osa-MIR159f:mirbase
          Length = 188

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 161 ttggattgaagggagctctacacctctctc 190
           ||||||||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacctctctc 188




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                      
Query: 9  tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
          |||||||||||||||||||| | |   ||| || || || |||||||||||||| |||||
Sbjct: 1  tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60

                          
Query: 69 atcccacagccctatc 84
          || || ||||||||||
Sbjct: 61 attcctcagccctatc 76



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 tttggattgaagggagctcta 180
           |||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 160 tttggattgaagggagctctaca 182
           |||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctaca 174




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 160 tttggattgaagggagctctaca 182
           |||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 160 tttggattgaagggagctctaca 182
           |||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 160 tttggattgaagggagctctaca 182
           |||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 114 tggcttgcatatctcaggagct 135
           ||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagct 151




>42700_zma-MIR159k:mirbase
          Length = 200

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198




>42699_zma-MIR159j:mirbase
          Length = 252

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250




>42691_zma-MIR159b:mirbase
          Length = 221

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201




>42634_tae-MIR159a:mirbase
          Length = 177

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173




>41919_osa-MIR159c:mirbase
          Length = 197

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 161 ttggattgaagggagctctacacctctctc 190
           |||||||||||||||||| ||| |||||||
Sbjct: 168 ttggattgaagggagctccacatctctctc 197




>41883_hvu-MIR159b:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 9   tgtttggattgaagggagctct 30




>41882_hvu-MIR159a:mirbase
          Length = 178

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tgtttggattgaagggagctct 179
           ||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 tttggattgaagggagctctac 181
           ||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184