miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 81.8 bits (41), Expect = 9e-17
 Identities = 82/93 (88%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggttgtgcctggctccctgtatgccacacg-tagagaccactccctttcccggattggct 64
          |||| ||||||||||||||||||||||| | |||||  || |||||| |  |||||||||
Sbjct: 1  ggttatgcctggctccctgtatgccacaagctagagttcattcccttccatggattggct 60

                                           
Query: 65 atttgcgggtggcgtgcgaggagccaagcatac 97
          ||| || ||||||||||||||||||||||||||
Sbjct: 61 att-gccggtggcgtgcgaggagccaagcatac 92




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 1  aaatgggttgtgcctggctccctgtatgccaca 33
          ||||||||| |||||||||||||||||||||||
Sbjct: 1  aaatgggttatgcctggctccctgtatgccaca 33



 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 72 ggtggcgtgcgaggagccaagcatac 97
          ||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatac 98




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 81/96 (84%), Gaps = 2/96 (2%)
 Strand = Plus / Plus

                                                                      
Query: 3  atgggttgtgcctggctccctgtatgccacacgtagagaccactccctt-tcccggattg 61
          ||||||| ||||||||||||||||||||||| | | |||||| ||  || |    |||||
Sbjct: 3  atgggttatgcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattg 62

                                              
Query: 62 gctatttgcgggtggcgtgcgaggagccaagcatac 97
          |||  |||| ||||||||||||||||||||||||||
Sbjct: 63 gct-gttgccggtggcgtgcgaggagccaagcatac 97




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  tgtgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccacac 44



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  gggtggcgtgcgaggagccaagcat 95
           ||||||||||| |||||||||||||
Sbjct: 78  gggtggcgtgcaaggagccaagcat 102




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  tgtgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||||
Sbjct: 2  tgtgcctggctccctgtatgccacac 27



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 71 gggtggcgtgcgaggagccaagcat 95
          ||||||||||| |||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagcat 86




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  tgtgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccacac 54



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  gggtggcgtgcgaggagccaagcat 95
           ||||||||||| |||||||||||||
Sbjct: 91  gggtggcgtgcaaggagccaagcat 115




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtgcctggctccctgtatgccacac 34
          |||||||||||||||||||||||||
Sbjct: 9  gtgcctggctccctgtatgccacac 33




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 4  tgggttgtgcctggctccctgtatgccac 32
          |||| ||||||||||||||||||||||||
Sbjct: 24 tgggatgtgcctggctccctgtatgccac 52




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtgcctggctccctgtatgccacac 34
          |||||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccacac 54



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  gggtggcgtgcgaggagccaagcat 95
           ||||||||||| |||||||||||||
Sbjct: 89  gggtggcgtgcaaggagccaagcat 113




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  tgtgcctggctccctgtatgccaca 33
          |||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccaca 36




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||
Sbjct: 2  tgcctggctccctgtatgccacac 25



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 71 gggtggcgtgcgaggagccaagcat 95
          ||||||||||| |||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagcat 84




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tgtgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tgtgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 7  tgtgcctggctccctgtatgccac 30




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccacac 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 71 gggtggcgtgcgaggagccaagca 94
          ||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccacac 24




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 68  tgcgggtggcgtgcgaggagccaagcat 95
           ||||| ||||||||||||||||||||||
Sbjct: 111 tgcggatggcgtgcgaggagccaagcat 138



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 8  tgcctggctccctgtatgccac 29




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  tgtgcctggctccctgtatgccac 32
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>41869_far-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tgcctggctccctgtatgccacac 34
          ||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacac 76




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 1  aaatgggttgtgcctggctccctgtatgccac 32
          ||||||| | ||||||||||||||||||||||
Sbjct: 22 aaatgggatatgcctggctccctgtatgccac 53



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 69  gcgggtggcgtgcgaggagccaagcat 95
           |||| ||||||||||||||||||||||
Sbjct: 117 gcggatggcgtgcgaggagccaagcat 143




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 gtgcctggctccctgtatgccaca 33
          ||||||||||||||||||||||||
Sbjct: 4  gtgcctggctccctgtatgccaca 27




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 gtgcctggctccctgtatgccaca 33
          ||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 2  aatgggttgtgcctggctccctgtatgccac 32
          |||||| | ||||||||||||||||||||||
Sbjct: 13 aatgggatatgcctggctccctgtatgccac 43



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 69  gcgggtggcgtgcgaggagccaagcat 95
           |||| ||||||||||||||||||||||
Sbjct: 86  gcggatggcgtgcgaggagccaagcat 112




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 68  tgcgggtggcgtgcgaggagccaagca 94
           ||||| |||||||||||||||||||||
Sbjct: 74  tgcggatggcgtgcgaggagccaagca 100



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gtgcctggctccctgtatgccac 32
          |||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccac 51



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  gggtggcgtgcgaggagccaagcat 95
           ||||||||||| |||||||||||||
Sbjct: 88  gggtggcgtgcaaggagccaagcat 112




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgtgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 68 tgcgggtggcgtgcgaggagccaagcat 95
          ||||| |||||||||||| |||||||||
Sbjct: 60 tgcggctggcgtgcgaggtgccaagcat 87




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 68  tgcgggtggcgtgcgaggagccaagcat 95
           ||||| ||||||||| ||||||||||||
Sbjct: 97  tgcggatggcgtgcgtggagccaagcat 124




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gtgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccac 26




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccac 32
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39463_ppt-MIR160i:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 gcctggctccctgtatgccac 32
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40