miRNEST 2.0, an integrative microRNA resource :: BLAST
>40340_rco-MIR160b:mirbase
Length = 96
Score = 81.8 bits (41), Expect = 9e-17
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 6 ggttgtgcctggctccctgtatgccacacg-tagagaccactccctttcccggattggct 64
|||| ||||||||||||||||||||||| | ||||| || |||||| | |||||||||
Sbjct: 1 ggttatgcctggctccctgtatgccacaagctagagttcattcccttccatggattggct 60
Query: 65 atttgcgggtggcgtgcgaggagccaagcatac 97
||| || ||||||||||||||||||||||||||
Sbjct: 61 att-gccggtggcgtgcgaggagccaagcatac 92
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 aaatgggttgtgcctggctccctgtatgccaca 33
||||||||| |||||||||||||||||||||||
Sbjct: 1 aaatgggttatgcctggctccctgtatgccaca 33
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 ggtggcgtgcgaggagccaagcatac 97
||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatac 98
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 81/96 (84%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 3 atgggttgtgcctggctccctgtatgccacacgtagagaccactccctt-tcccggattg 61
||||||| ||||||||||||||||||||||| | | |||||| || || | |||||
Sbjct: 3 atgggttatgcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattg 62
Query: 62 gctatttgcgggtggcgtgcgaggagccaagcatac 97
||| |||| ||||||||||||||||||||||||||
Sbjct: 63 gct-gttgccggtggcgtgcgaggagccaagcatac 97
>42702_zma-MIR160b:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccacac 44
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagcat 102
>41923_osa-MIR160a:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccacac 27
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagcat 86
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccacac 54
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 91 gggtggcgtgcaaggagccaagcat 115
>42701_zma-MIR160a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacac 34
|||||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccacac 33
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tgggttgtgcctggctccctgtatgccac 32
|||| ||||||||||||||||||||||||
Sbjct: 24 tgggatgtgcctggctccctgtatgccac 52
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacac 34
|||||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccacac 54
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 89 gggtggcgtgcaaggagccaagcat 113
>39374_pab-MIR160a:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccaca 33
|||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccaca 36
>42707_zma-MIR160g:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccacac 25
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagcat 84
>42703_zma-MIR160c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccac 30
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagca 94
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 tgcgggtggcgtgcgaggagccaagcat 95
||||| ||||||||||||||||||||||
Sbjct: 111 tgcggatggcgtgcgaggagccaagcat 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>41869_far-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacac 76
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aaatgggttgtgcctggctccctgtatgccac 32
||||||| | ||||||||||||||||||||||
Sbjct: 22 aaatgggatatgcctggctccctgtatgccac 53
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gcgggtggcgtgcgaggagccaagcat 95
|||| ||||||||||||||||||||||
Sbjct: 117 gcggatggcgtgcgaggagccaagcat 143
>40020_ath-MIR160b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43
>42636_tae-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 aatgggttgtgcctggctccctgtatgccac 32
|||||| | ||||||||||||||||||||||
Sbjct: 13 aatgggatatgcctggctccctgtatgccac 43
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gcgggtggcgtgcgaggagccaagcat 95
|||| ||||||||||||||||||||||
Sbjct: 86 gcggatggcgtgcgaggagccaagcat 112
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tgcgggtggcgtgcgaggagccaagca 94
||||| |||||||||||||||||||||
Sbjct: 74 tgcggatggcgtgcgaggagccaagca 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41924_osa-MIR160b:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccac 32
|||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccac 51
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gggtggcgtgcgaggagccaagcat 95
||||||||||| |||||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcat 112
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>42705_zma-MIR160e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 68 tgcgggtggcgtgcgaggagccaagcat 95
||||| |||||||||||| |||||||||
Sbjct: 60 tgcggctggcgtgcgaggtgccaagcat 87
>42704_zma-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 68 tgcgggtggcgtgcgaggagccaagcat 95
||||| ||||||||| ||||||||||||
Sbjct: 97 tgcggatggcgtgcgtggagccaagcat 124
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 gcctggctccctgtatgccac 32
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40