miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 10  atgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcgga 69
           ||||||||||||||||||||||||||||||| ||| |    |   ||| ||||||| |||
Sbjct: 20  atgcctggctccctgtatgccatttgcaaagcccatcaagagtccggtggccttcgtgga 79

                                     
Query: 70  tggcgtgcgaggagccatgcatgcat 95
           |||| |||||||||||||||||||||
Sbjct: 80  tggcatgcgaggagccatgcatgcat 105




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                      
Query: 10 atgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcgga 69
          |||||||||||||||||||||||||||| || ||||| |   || | | ||||||| |||
Sbjct: 10 atgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgga 69

                                
Query: 70 tggcgtgcgaggagccatgcat 91
          ||||||  ||||||||||||||
Sbjct: 70 tggcgtatgaggagccatgcat 91




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 10 atgcctggctccctgtatgccatttgcaaag 40
          |||||||||||||||||||||||||||||||
Sbjct: 19 atgcctggctccctgtatgccatttgcaaag 49




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcggat 70
          |||||||||||||||||||||||||  |||| || | || | ||||| | || ||| |||
Sbjct: 6  tgcctggctccctgtatgccatttgtgaagttcatcagaagcttggtggtctccgcagat 65

                                 
Query: 71 ggcgtgcgaggagccatgcatgc 93
          ||| ||| |||||||||||||||
Sbjct: 66 ggcatgcaaggagccatgcatgc 88




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 11 tgcctggctccctgtatgccatttgcaaagtccacc 46
          ||||||||||||||||||||||||||| || |||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccacc 46




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 11 tgcctggctccctgtatgccatttgcaaagtc 42
          ||||||||||||||||||||||||||| ||||
Sbjct: 33 tgcctggctccctgtatgccatttgcagagtc 64




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 11 tgcctggctccctgtatgccatttgca 37
          |||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgca 37




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 tgcctggctccctgtatgccatttgc 36
          ||||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccatttgc 26




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 11 tgcctggctccctgtatgccatttgcaaagtcca 44
          ||||||||||||||||||||||||| | ||||||
Sbjct: 6  tgcctggctccctgtatgccatttgtagagtcca 39




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 64  cgcggatggcgtgcgaggagccatgcatg 92
           ||||||||||||||||||||||| |||||
Sbjct: 85  cgcggatggcgtgcgaggagccaagcatg 113



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 21 atgcctggctccctgtatgcca 42




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 64  cgcggatggcgtgcgaggagccatgcatg 92
           ||||||||||||||||||||||| |||||
Sbjct: 116 cgcggatggcgtgcgaggagccaagcatg 144



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 31 atgcctggctccctgtatgcca 52




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tgcctggctccctgtatgccatttg 35
          |||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 69  atggcgtgcgaggagccatgcatg 92
           ||||||||||||||||||||||||
Sbjct: 79  atggcgtgcgaggagccatgcatg 102




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tgcctggctccctgtatgccatttg 35
          |||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 65  gcggatggcgtgcgaggagccatgcatg 92
           |||||||||||||||||||||| |||||
Sbjct: 112 gcggatggcgtgcgaggagccaagcatg 139



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 7  atgcctggctccctgtatgcca 28




>41869_far-MIR160:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  catgcctggctccctgtatgcca 31
          |||||||||||||||||||||||
Sbjct: 51 catgcctggctccctgtatgcca 73




>41312_ptc-MIR160h:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 tgcctggctccctgtatgccatttgca 37
          |||||||||||||| ||||||||||||
Sbjct: 11 tgcctggctccctgcatgccatttgca 37




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 atgcctggctccctgtatgccat 32
          |||||||||||||||||||||||
Sbjct: 25 atgcctggctccctgtatgccat 47




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 atgcctggctccctgtatgccat 32
          |||||||||||||||||||||||
Sbjct: 3  atgcctggctccctgtatgccat 25




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 atgcctggctccctgtatgccat 32
          |||||||||||||||||||||||
Sbjct: 41 atgcctggctccctgtatgccat 63




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 8  atgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 20 atgcctggctccctgtatgcca 41



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 65  gcggatggcgtgcgaggagccatgcatg 92
           |||||||||||||| ||||||| |||||
Sbjct: 98  gcggatggcgtgcgtggagccaagcatg 125




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 65 gcggatggcgtgcgaggagcca 86
          ||||||||||||||||||||||
Sbjct: 75 gcggatggcgtgcgaggagcca 96



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccat 32
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccat 32
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 5  atgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 4  atgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atgcctggctccctgtatgcca 31
          ||||||||||||||||||||||
Sbjct: 23 atgcctggctccctgtatgcca 44




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccat 32
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 tgcctggctccctgtatgccatttgc 36
          ||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tgcctggctccctgtatgccat 32
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 atgcctggctccctgtatgcc 30
          |||||||||||||||||||||
Sbjct: 20 atgcctggctccctgtatgcc 40




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 atgcctggctccctgtatgcc 30
          |||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcc 30




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tgcctggctccctgtatgcca 31
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34