miRNEST 2.0, an integrative microRNA resource :: BLAST
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 135 bits (68), Expect = 7e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 6 atatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcg 65
|||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct: 6 atatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccg 65
Query: 66 tggatggcgtatgaggagccatgcatat 93
||||||||||||||||||||||||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatat 93
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 6 atatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcg 65
|||| |||||||||||||||||||||||||||||||||| ||| | |||||||||| ||
Sbjct: 6 atatgtgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccg 65
Query: 66 tggatggcgtatgaggagccatgcatat 93
||||||||||||||||||||||||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatat 93
>41219_csi-MIR160:mirbase
Length = 143
Score = 117 bits (59), Expect = 2e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
|||||||||||||||||||||||||||||| | | || ||||||||||||| |||||||
Sbjct: 33 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 92
Query: 71 ggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||
Sbjct: 93 ggcgtatgaggagccatgcatat 115
>40019_ath-MIR160a:mirbase
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68
|||||||||||||||||||||||| ||| ||||||| || ||||||| ||| |||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtgg 60
Query: 69 atggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||
Sbjct: 61 atggcgtatgaggagccatgcatat 85
>40436_gma-MIR160:mirbase
Length = 119
Score = 85.7 bits (43), Expect = 6e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
||||||||||||||||||||||||| ||||| || || |||| ||| |||| ||||||
Sbjct: 21 tgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgtggat 80
Query: 71 ggcgtatgaggagccatgcatat 93
|||||||||||||||| ||||||
Sbjct: 81 ggcgtatgaggagccaagcatat 103
>39807_aly-MIR160a:mirbase
Length = 158
Score = 81.8 bits (41), Expect = 9e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68
|||||||||||||||||||||||| ||| |||| || || ||||||| ||| |||||
Sbjct: 40 tatgcctggctccctgtatgccatatgctgagctcatcgagt-atcgatgacctccgtgg 98
Query: 69 atggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||
Sbjct: 99 atggcgtatgaggagccatgcatat 123
>41529_sly-MIR160a:mirbase
Length = 129
Score = 69.9 bits (35), Expect = 3e-13
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 7 tatatgcctggctccctgtatgccatttgcagagcccaccg--gcacatcgat-ggcctt 63
||||||||||||||||||||||||||||||| ||| ||||| | |||||| ||||||
Sbjct: 16 tatatgcctggctccctgtatgccatttgcaaagctcaccgtaatatatcgatgggcctt 75
Query: 64 cgtggatggcgtatgaggagccatgcatat 93
|| |||||||||||||||||| ||||||
Sbjct: 76 gttgaatggcgtatgaggagccaagcatat 105
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68
||||||||||||||||||||||||||||| |||||| | | || ||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagcccatcaagagtccggtggccttcgtgg 78
Query: 69 atggcgtatgaggagccatgcat 91
||||| | ||||||||||||||
Sbjct: 79 atggcatgcgaggagccatgcat 101
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgga 69
|||||||||||||||||||||||||||| || ||||| | || | | ||||||| |||
Sbjct: 10 atgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcgga 69
Query: 70 tggcgtatgaggagccatgcat 91
|||||| ||||||||||||||
Sbjct: 70 tggcgtgcgaggagccatgcat 91
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
|||||||||||||| |||||||||||| ||| || | | || ||| ||||||| ||||||
Sbjct: 11 tgcctggctccctgcatgccatttgcatagctcatcagaacgtcggtggccttggtggat 70
Query: 71 ggcgt 75
|||||
Sbjct: 71 ggcgt 75
>40312_bra-MIR160a:mirbase
Length = 127
Score = 58.0 bits (29), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68
|||||||||||||||||||||||| | ||| || || | ||| |||| ||| ||||
Sbjct: 24 tatgcctggctccctgtatgccatcctctaagctcatcgac-cattgatgacctccgtga 82
Query: 69 atggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||
Sbjct: 83 atggcgtatgaggagccatgcatat 107
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 55 gatggccttcgtggatggcgtatgaggagccatgcata 92
||||||||| ||||||||||| |||||||||||||||
Sbjct: 45 gatggcctttgtggatggcgtgcgaggagccatgcata 82
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 60 ccttcgtggatggcgtatgaggagccatgcatat 93
|||| |||||||||||||||||||||| ||||||
Sbjct: 55 cctttgtggatggcgtatgaggagccaagcatat 88
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagag 40
||||||||||||||||||||||||| ||||
Sbjct: 6 tgcctggctccctgtatgccatttgtagag 35
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 60 ccttcgtggatggcgtatgaggagccatgcatat 93
|||| |||||||||||||||||||||| ||||||
Sbjct: 55 cctttgtggatggcgtatgaggagccaagcatat 88
>40658_mtr-MIR160:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagag 40
||||||||||||||||||||||||| ||||
Sbjct: 21 tgcctggctccctgtatgccatttgtagag 50
>40339_rco-MIR160a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttg 35
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcc 30
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcc 30
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
