miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41597_vvi-MIR169a:mirbase
          Length = 124

 Score =  214 bits (108), Expect = 1e-56
 Identities = 117/120 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtggaatgcagccaagaatgatttgccggaatttatatatagtgagaagagaagaggc 60
           |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3   gagtggaatgcagccaaggatgacttgccggaatttatatatagtgagaagagaagaggc 62

                                                                       
Query: 61  tataggctttcacatatatagtgaaccctggcaagttgtccttggctacatttgattctc 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tatatgctttcacatatatagtgaaccctggcaagttgtccttggctacatttgattctc 122




>41380_ptc-MIR169z:mirbase
          Length = 118

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 6  gaatgcagccaagaatgatttgccgg 31
          ||||||||||||||||||||||||||
Sbjct: 6  gaatgcagccaagaatgatttgccgg 31



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 85  accctggcaagttgtccttggctacatttg 114
           |||| |||||||||| ||||||||||||||
Sbjct: 87  accccggcaagttgttcttggctacatttg 116




>41607_vvi-MIR169k:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                      
Query: 1  gagtggaatgcagccaagaatgatttgccggaatttatatatag 44
          ||||||| |||||||||| |||| ||||||||||| | ||||||
Sbjct: 3  gagtggagtgcagccaaggatgacttgccggaattcacatatag 46



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  ccctggcaagttgtccttggctac 109
           |||||||| |||||||||||||||
Sbjct: 86  ccctggcaggttgtccttggctac 109




>41606_vvi-MIR169j:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                      
Query: 1  gagtggaatgcagccaagaatgatttgccggaatttatatatag 44
          ||||||| |||||||||| |||| ||||||||||| | ||||||
Sbjct: 3  gagtggagtgcagccaaggatgacttgccggaattcacatatag 46



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  ccctggcaagttgtccttggctac 109
           |||||||| |||||||||||||||
Sbjct: 86  ccctggcaggttgtccttggctac 109




>41599_vvi-MIR169c:mirbase
          Length = 90

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 90  ggcaagttgtccttggctacatt 112
           |||||||||||||||||||||||
Sbjct: 58  ggcaagttgtccttggctacatt 80



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 1  gagtggaatgcagccaagaatgatttgccgga 32
          |||| ||||||||||||| |||| ||||||||
Sbjct: 3  gagtagaatgcagccaaggatgacttgccgga 34




>42760_zma-MIR169r:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  ggcaagttgtccttggctacat 111
           ||||||||||||||||||||||
Sbjct: 105 ggcaagttgtccttggctacat 126




>41106_tcc-MIR169e:mirbase
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  ggcaagttgtccttggctacat 111
           ||||||||||||||||||||||
Sbjct: 109 ggcaagttgtccttggctacat 130




>40045_ath-MIR169a:mirbase
          Length = 226

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 90  ggcaagttgtccttggctaca 110
           |||||||||||||||||||||
Sbjct: 190 ggcaagttgtccttggctaca 210




>39834_aly-MIR169a:mirbase
          Length = 263

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 90  ggcaagttgtccttggctaca 110
           |||||||||||||||||||||
Sbjct: 216 ggcaagttgtccttggctaca 236




>41965_osa-MIR169b:mirbase
          Length = 128

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ggcaagttgtccttggctac 109
           ||||||||||||||||||||
Sbjct: 100 ggcaagttgtccttggctac 119




>41361_ptc-MIR169g:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                              
Query: 1  gagtggaatgcagccaagaatgatttgccggaattt 36
          |||| ||||||||||||| |||| ||||||| ||||
Sbjct: 1  gagtagaatgcagccaaggatgacttgccggcattt 36




>41358_ptc-MIR169d:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                              
Query: 1  gagtggaatgcagccaagaatgatttgccggaattt 36
          |||| ||||||||||||| |||| ||||||| ||||
Sbjct: 1  gagtcgaatgcagccaaggatgacttgccggcattt 36