miRNEST 2.0, an integrative microRNA resource :: BLAST
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 16 tgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgattgag 75
|||||| | |||||||||||| |||| |||||| | ||| |||||||||||||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 76 ccgtgccaatatca 89
||||||||||||||
Sbjct: 63 ccgtgccaatatca 76
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 79.8 bits (40), Expect = 3e-16
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
||||||||| | ||||||||||| ||||| ||||||||||| || |||| ||||||||
Sbjct: 10 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 69
Query: 73 gagccgtgccaatatc 88
||||||||||||||||
Sbjct: 70 gagccgtgccaatatc 85
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
||||||||| |||| |||||| | |||| ||||| ||| ||||||||||| |||||||
Sbjct: 20 tgatgttggcacggttcaatcggatcaaatctctcagtggctgagtcctttagtctgatt 79
Query: 73 gagccgtgccaatatca 89
|||||||||||||||||
Sbjct: 80 gagccgtgccaatatca 96
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 8e-14
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 14 gatgttgggacggctcaatcaaaccaaagatctcaatggtt--gagtcctttaatctgat 71
|||||||| | |||||||||||| |||| || ||| |||| | |||||||||||||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
Query: 72 tgagccgtgccaatatcat 90
|||||||||||||||||||
Sbjct: 73 tgagccgtgccaatatcat 91
>40363_rco-MIR171e:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 57 gtcctttaatctgattgagccgtgccaatatc 88
||||||||||||||||||||||||||||||||
Sbjct: 48 gtcctttaatctgattgagccgtgccaatatc 79
>40361_rco-MIR171c:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tgagtcctttaatctgattgagccgtgccaatatc 88
||||| |||||||||||||||||||||||||||||
Sbjct: 48 tgagttctttaatctgattgagccgtgccaatatc 82
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 52 gttgagtcctttaatctgattgagccgtgccaatatca 89
|||| ||| |||||||||||||||||||||||||||||
Sbjct: 55 gttgggtcgtttaatctgattgagccgtgccaatatca 92
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 52 gttgagtcctttaatctgattgagccgtgccaatatca 89
|||| ||| |||||||||||||||||||||||||||||
Sbjct: 55 gttgggtcttttaatctgattgagccgtgccaatatca 92
>40695_mtr-MIR171:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 53 ttgagtcctttaatctgattgagccgtgccaatatcat 90
|||||| ||||| |||||||||| ||||||||||||||
Sbjct: 60 ttgagttctttagtctgattgagtcgtgccaatatcat 97
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 61 tttaatctgattgagccgtgccaatatca 89
|||||| ||||||||||||||||||||||
Sbjct: 70 tttaatttgattgagccgtgccaatatca 98
>42770_zma-MIR171j:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatca 89
||||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatca 89
||||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatca 89
||||||||||||||||||||||||
Sbjct: 95 tctgattgagccgtgccaatatca 118
>41874_far-MIR171:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atctgattgagccgtgccaatatc 88
||||||||||||||||||||||||
Sbjct: 87 atctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atctgattgagccgtgccaatatc 88
||||||||||||||||||||||||
Sbjct: 111 atctgattgagccgtgccaatatc 134
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 tctgattgagccgtgccaatatc 88
|||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatca 136
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatca 143
>41983_osa-MIR171c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41982_osa-MIR171b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatca 85
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatca 91
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatca 93
>41216_crt-MIR171:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatca 182
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatca 98
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatca 93
>40360_rco-MIR171b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatca 84
>40359_rco-MIR171a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatca 85
>40318_bra-MIR171a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40062_ath-MIR171c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatca 108
>39851_aly-MIR171c:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 tgattgagccgtgccaatatca 89
||||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatca 95
>42641_tae-MIR171b:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgtgccaatatca 89
|||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatca 110
