miRNEST 2.0, an integrative microRNA resource :: BLAST
>40360_rco-MIR171b:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcacgt 91
||||||||||||||||||||||||||||||||
Sbjct: 56 tgttgtttgattgagccgtgccaatatcacgt 87
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 57 ctctgttgtttgattgagccgtgccaatatcacgt 91
|||| ||||||||||||||||||||||||||||||
Sbjct: 61 ctctattgtttgattgagccgtgccaatatcacgt 95
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacgt 91
||||||||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatatcacgt 96
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 tctgttgtttgattgagccgtgccaatatcacgt 91
|||||| |||||||||||||||||||||||||||
Sbjct: 68 tctgttatttgattgagccgtgccaatatcacgt 101
>39851_aly-MIR171c:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacgt 91
||||||||||||||||||||||||||||||
Sbjct: 69 ttgtttgattgagccgtgccaatatcacgt 98
>40318_bra-MIR171a:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
|||||||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatatcacg 85
>40305_bol-MIR171a:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
|||||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatcacg 91
>40289_bna-MIR171e:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
|||||||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatatcacg 90
>40288_bna-MIR171d:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
|||||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatcacg 91
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgtc 92
||||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacgtc 87
>41983_osa-MIR171c:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgtc 92
||||||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcacgtc 94
>41982_osa-MIR171b:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgtc 92
||||||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacgtc 95
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcacgt 91
|||| |||||||||||||||||||||||||||
Sbjct: 60 tgttatttgattgagccgtgccaatatcacgt 91
>42770_zma-MIR171j:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcacgtcc 93
|||||||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcacgtcc 116
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcacgtcc 93
|||||||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcacgtcc 119
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tgtttgattgagccgtgccaatatcac 89
|||||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatatcac 144
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
|||||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacgt 94
>41216_crt-MIR171:mirbase
Length = 201
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
|||||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatcacgt 185
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 61 gttgtttgattgagccgtgccaatatc 87
|||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 61 gttgtttgattgagccgtgccaatatc 87
|||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatatc 100
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
|||||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcacgt 101
>40359_rco-MIR171a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
|||||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcacgt 88
>40061_ath-MIR171b:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcacg 90
||||||| |||||||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatatcacg 98
>39850_aly-MIR171b:mirbase
Length = 137
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcacg 90
||||||| |||||||||||||||||||||||
Sbjct: 79 tgttgttcgattgagccgtgccaatatcacg 109
>42763_zma-MIR171c:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgtcct 94
||||| ||||||||||||||||||||||||
Sbjct: 77 tttgactgagccgtgccaatatcacgtcct 106
>42762_zma-MIR171b:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacg 90
||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
>40457_gma-MIR171c:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcac 89
|||| |||||||||||||||||||||||||
Sbjct: 65 tgttatttgattgagccgtgccaatatcac 94
>40062_ath-MIR171c:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacg 90
||||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcacg 110
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcac 89
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>40321_bra-MIR171d:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatcacg 93
>40320_bra-MIR171c:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatcacg 87
>40319_bra-MIR171b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatcacg 94
>40287_bna-MIR171c:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatcacg 87
>40286_bna-MIR171b:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatcacg 93
>40285_bna-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ttgtttgattgagccgtgccaatatcacg 90
||||| |||||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatcacg 94
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 ttgattgagccgtgccaatatcac 89
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 ttgattgagccgtgccaatatcac 89
||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 gtttgattgagccgtgccaatatc 87
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 60 tgttgtttgattgagccgtgccaatatcacgt 91
|||| ||| |||||||||||||||||||||||
Sbjct: 55 tgttatttaattgagccgtgccaatatcacgt 86
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 gtttgattgagccgtgccaatatc 87
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 gtttgattgagccgtgccaatatc 87
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40454_gma-MIR171a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 ctgttgtttgattgagccgtgccaatatcacg 90
||||| ||| ||||||||||||||||||||||
Sbjct: 60 ctgttttttcattgagccgtgccaatatcacg 91
>42641_tae-MIR171b:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgtgccaatatcacg 90
|||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcacg 112
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcac 89
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
>41540_sly-MIR171c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 atacacgagatattgatacggttcaattagaaagc 38
||||||||||||||| | ||||||||| |||||||
Sbjct: 12 atacacgagatattggtgcggttcaatgagaaagc 46
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
||||||||||||| |||||||||||||
Sbjct: 76 tttgattgagccgcgccaatatcacgt 102
>41539_sly-MIR171b:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 acgagatattgatacggttcaattagaaagc 38
||||||||||| | |||||||||||||||||
Sbjct: 1 acgagatattggtgcggttcaattagaaagc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 attgagccgtgccaatatcacgt 91
|||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacgt 86
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcac 89
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcac 89
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41231_csi-MIR171a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
||||||||||||| |||||||||||||
Sbjct: 65 tttgattgagccgcgccaatatcacgt 91
>41211_ccl-MIR171:mirbase
Length = 321
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatcacgt 91
||||||||||||| |||||||||||||
Sbjct: 120 tttgattgagccgcgccaatatcacgt 146
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcac 89
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatcac 89
|||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatatc 87
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatca 88
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgtgccaatatca 88
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttgattgagccgtgccaatat 86
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgtgccaatatcac 89
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
