miRNEST 2.0, an integrative microRNA resource :: BLAST
>40363_rco-MIR171e:mirbase
Length = 84
Score = 135 bits (68), Expect = 7e-33
Identities = 78/80 (97%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatct 69
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ggggatgttggaatggctcaatcaaatcaaatctcccaa-agttttgggtcctttaatct 59
Query: 70 gattgagccgtgccaatatc 89
||||||||||||||||||||
Sbjct: 60 gattgagccgtgccaatatc 79
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 103 bits (52), Expect = 2e-23
Identities = 76/83 (91%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaagggttt--tgggtcctttaat 67
|||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaat 75
Query: 68 ctgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 76 ttgattgagccgtgccaatatca 98
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 89.7 bits (45), Expect = 4e-19
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 15 tgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgattg 74
|||||||||||||||||||||| ||| ||| ||| | || |||||||||||||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagatt--gggtcctttaatctgattg 60
Query: 75 agccgtgccaatatca 90
||||||||||||||||
Sbjct: 61 agccgtgccaatatca 76
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 87.7 bits (44), Expect = 1e-18
Identities = 75/85 (88%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaag----ggttttgggtccttta 65
||||||||||| |||||||||||| |||||||||||||| | | ||||||| ||||
Sbjct: 8 ggggatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgttta 67
Query: 66 atctgattgagccgtgccaatatca 90
|||||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatca 92
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 79.8 bits (40), Expect = 4e-16
Identities = 74/85 (87%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaag----ggttttgggtccttta 65
||||||||||| |||||||||||| ||||||||||||| | | ||||||| ||||
Sbjct: 8 ggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttgggtctttta 67
Query: 66 atctgattgagccgtgccaatatca 90
|||||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatca 92
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 71.9 bits (36), Expect = 9e-14
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
|||||||| | |||||||||||| |||| || ||| |||| | |||||||||||||||
Sbjct: 14 gatgttgggacggctcaatcaaaccaaagatctcaatggtt--gagtcctttaatctgat 71
Query: 73 tgagccgtgccaatatcat 91
|||||||||||||||||||
Sbjct: 72 tgagccgtgccaatatcat 90
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 25 gctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgattgagccgtgcca 84
|||||||||||||||| | | ||| |||| |||| |||| |||||||||||||||||||
Sbjct: 23 gctcaatcaaatcaaagcactcaatggtt--gggttctttcatctgattgagccgtgcca 80
Query: 85 atatc 89
|||||
Sbjct: 81 atatc 85
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 58 gtcctttaatctgattgagccgtgccaatatca 90
|||||||| ||||||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatca 96
>40361_rco-MIR171c:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 61 ctttaatctgattgagccgtgccaatatc 89
|||||||||||||||||||||||||||||
Sbjct: 54 ctttaatctgattgagccgtgccaatatc 82
>42770_zma-MIR171j:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatca 90
||||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatca 90
||||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatca 90
||||||||||||||||||||||||
Sbjct: 95 tctgattgagccgtgccaatatca 118
>41874_far-MIR171:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 atctgattgagccgtgccaatatc 89
||||||||||||||||||||||||
Sbjct: 87 atctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 atctgattgagccgtgccaatatc 89
||||||||||||||||||||||||
Sbjct: 111 atctgattgagccgtgccaatatc 134
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tctgattgagccgtgccaatatc 89
|||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>40695_mtr-MIR171:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 61 ctttaatctgattgagccgtgccaatatcat 91
||||| |||||||||| ||||||||||||||
Sbjct: 67 ctttagtctgattgagtcgtgccaatatcat 97
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatca 136
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatca 143
>41983_osa-MIR171c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41982_osa-MIR171b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatca 85
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatca 91
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatca 93
>41216_crt-MIR171:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatca 182
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatca 98
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatca 93
>40360_rco-MIR171b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatca 84
>40359_rco-MIR171a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatca 85
>40318_bra-MIR171a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40062_ath-MIR171c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatca 108
>39851_aly-MIR171c:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgtgccaatatca 90
||||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatca 95
