miRNEST 2.0, an integrative microRNA resource :: BLAST
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 113/134 (84%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 9 atggagcatcatcaagattcacaag---tattgagactcagtgcgtggtggtgatggtga 65
||||||||||||||||||||||||| |||| | || |||| |||||| ||||||||
Sbjct: 11 atggagcatcatcaagattcacaagctttattagggct-agtgtgtggtgatgatggtgg 69
Query: 66 cttttg-tggtcccttccta-cactccgatggctctttgatgtgggaatcttgatgatgc 123
|||||| ||||||||| | || ||| || || |||||| ||||||||||||||||||
Sbjct: 70 cttttggtggtccctttttttcaatccaatagccctttgaattgggaatcttgatgatgc 129
Query: 124 tgcagcggcaataa 137
||||||||||||||
Sbjct: 130 tgcagcggcaataa 143
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaataaa 138
|||||||||||||||||||||||||||||||||
Sbjct: 113 tgggaatcttgatgatgctgcagcggcaataaa 145
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaa 32
|||||| |||||||||||||||||||||||||
Sbjct: 10 gtttgctgatggagcatcatcaagattcacaa 41
>40461_gma-MIR172d:mirbase
Length = 150
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 98 ctttgatgtgggaatcttgatgatgctgcagcggcaataaa 138
||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 101 ctttgatatgggaatcttgatgatgctgcagcagcaataaa 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 ttgcggatggagcatcatcaagattcacaag 33
|||| ||||||||||||||||||||||||||
Sbjct: 15 ttgcagatggagcatcatcaagattcacaag 45
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaataa 137
||||||||||||||||||||||||||||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaataa 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaa 32
|||||| ||||||||| |||||||||||||||
Sbjct: 3 gtttgccgatggagcaccatcaagattcacaa 34
>40366_rco-MIR172:mirbase
Length = 144
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 98 ctttgatgtgggaatcttgatgatgctgcagcggca 133
||||||| ||||||||||||||||||||||||||||
Sbjct: 109 ctttgatatgggaatcttgatgatgctgcagcggca 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gatggagcatcatcaagattcacaa 32
|||||||||||||||||||||||||
Sbjct: 3 gatggagcatcatcaagattcacaa 27
>40462_gma-MIR172e:mirbase
Length = 153
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaataaa 138
|||||||||||||||||||||||| ||||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaataaa 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaag 33
|||||| | ||||||||||||||||||||||||
Sbjct: 13 gtttgccggtggagcatcatcaagattcacaag 45
>40460_gma-MIR172c:mirbase
Length = 153
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaataaa 138
|||||||||||||||||||||||| ||||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaataaa 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaag 33
|||||| | ||||||||||||||||||||||||
Sbjct: 13 gtttgccggtggagcatcatcaagattcacaag 45
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcaca 31
|||||||| ||||||||||||||||||||||
Sbjct: 3 gtttgcgggtggagcatcatcaagattcaca 33
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaataa 137
||||||||||||||||||| |||||||||
Sbjct: 112 gaatcttgatgatgctgcatcggcaataa 140
>40459_gma-MIR172b:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcaca 31
||||||||||| |||||||||||||||||||
Sbjct: 13 gtttgcggatgtagcatcatcaagattcaca 43
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 99 tttgatgtgggaatcttgatgatgctgca 127
||||||||| |||||||||||||||||||
Sbjct: 105 tttgatgtgagaatcttgatgatgctgca 133
>40066_ath-MIR172d:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaat 135
|||||||||||||||||||||||||||
Sbjct: 89 gaatcttgatgatgctgcagcggcaat 115
>39855_aly-MIR172d:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaat 135
|||||||||||||||||||||||||||
Sbjct: 113 gaatcttgatgatgctgcagcggcaat 139
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaataaa 138
||||||||||||||||||| ||||||||||
Sbjct: 150 gaatcttgatgatgctgcatcggcaataaa 179
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcaca 31
|||||||| || |||||||||||||||||||
Sbjct: 13 gtttgcgggtgtagcatcatcaagattcaca 43
>40458_gma-MIR172a:mirbase
Length = 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tttgcggatggagcatcatcaagattcaca 31
|||||||||| |||||||||||||||||||
Sbjct: 14 tttgcggatgtagcatcatcaagattcaca 43
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaataa 137
||||||||||||||||||| |||||||||
Sbjct: 133 gaatcttgatgatgctgcatcggcaataa 161
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaa 134
|||||||||||||||||||||| ||||||
Sbjct: 102 tgggaatcttgatgatgctgcatcggcaa 130
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgcagcggcaa 134
|||||||||||||||||||||| ||||||
Sbjct: 151 tgggaatcttgatgatgctgcatcggcaa 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 5 gcggatggagcatcatcaagattcacaag 33
||||||| ||||||||||||||||||||
Sbjct: 7 gcggatgcggcatcatcaagattcacaag 35
>42779_zma-MIR172e:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 tgtgggaatcttgatgatgctgca 127
||||||||||||||||||||||||
Sbjct: 131 tgtgggaatcttgatgatgctgca 154
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 tgtgggaatcttgatgatgctgca 127
||||||||||||||||||||||||
Sbjct: 146 tgtgggaatcttgatgatgctgca 169
>41991_osa-MIR172b:mirbase
Length = 238
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 tgtgggaatcttgatgatgctgca 127
||||||||||||||||||||||||
Sbjct: 204 tgtgggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 tgtgggaatcttgatgatgctgca 127
||||||||||||||||||||||||
Sbjct: 200 tgtgggaatcttgatgatgctgca 223
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 109 gaatcttgatgatgctgcagcggcaata 136
||||||||||||||||||| ||||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaata 1
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 109 gaatcttgatgatgctgcagcggcaata 136
||||||||||||||||||| ||||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaata 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 gtttgcggatggagcatcatcaagattcaca 31
||||||| ||| |||||||||||||||||||
Sbjct: 108 gtttgcgcatgtagcatcatcaagattcaca 78
>41050_ghr-MIR172:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaa 32
|||||| | |||||||||||||||||||||||
Sbjct: 8 gtttgctgttggagcatcatcaagattcacaa 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaataa 137
||||| |||||||||||||| ||||||||
Sbjct: 91 gaatcctgatgatgctgcagtggcaataa 119
>40463_gma-MIR172f:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 gcggatggagcatcatcaagattcaca 31
||||||| |||||||||||||||||||
Sbjct: 1 gcggatgtagcatcatcaagattcaca 27
>40067_ath-MIR172e:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 gtgggaatcttgatgatgctgca 127
|||||||||||||||||||||||
Sbjct: 92 gtgggaatcttgatgatgctgca 114
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tggagcatcatcaagattcacaa 32
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaat 135
||||||||||||||||||||| |||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaat 125
>39856_aly-MIR172e:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 gtgggaatcttgatgatgctgca 127
|||||||||||||||||||||||
Sbjct: 95 gtgggaatcttgatgatgctgca 117
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tggagcatcatcaagattcacaa 32
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaat 135
||||||||||||||||||||| |||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaat 125
>39852_aly-MIR172a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaat 135
||||||||||||||||||| |||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaat 126
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaa 134
||||||||||||||||||| ||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125
>41235_csi-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 ggaatcttgatgatgctgcagc 129
||||||||||||||||||||||
Sbjct: 120 ggaatcttgatgatgctgcagc 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaa 32
|||||| | ||||||| |||||||||||||||
Sbjct: 4 gtttgcagttggagcaccatcaagattcacaa 35
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgca 127
||||||||||||||||||||||
Sbjct: 84 tgggaatcttgatgatgctgca 105
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 tgggaatcttgatgatgctgca 127
||||||||||||||||||||||
Sbjct: 121 tgggaatcttgatgatgctgca 142
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtttgcggatggagcatcatcaagattcacaa 32
|||||| |||| |||||||||||||||||||
Sbjct: 13 gtttgcagatgcggcatcatcaagattcacaa 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtttgcggatggagcatcatcaagattc 28
|||||| |||| ||||||||||||||||
Sbjct: 151 gtttgctgatgcagcatcatcaagattc 124
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggcaataaa 138
||||||||||||||||||| |||| |||||
Sbjct: 121 gaatcttgatgatgctgcatcggccataaa 150
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 4 tgcggatggagcatcatcaagattc 28
|||||||| ||||||||||||||||
Sbjct: 104 tgcggatgcagcatcatcaagattc 80
>41725_ata-MIR172:mirbase
Length = 277
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 4 tgcggatggagcatcatcaagattc 28
|||||||| ||||||||||||||||
Sbjct: 234 tgcggatgcagcatcatcaagattc 210
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 104 tgtgggaatcttgatgatgctgca 127
|||| |||||||||||||||||||
Sbjct: 72 tgtgtgaatcttgatgatgctgca 95
>41993_osa-MIR172d:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 gtttgcggatggagcatcatcaagattc 28
|||||| |||| ||||||||||||||||
Sbjct: 119 gtttgctgatgcagcatcatcaagattc 92
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 gatggagcatcatcaagattcaca 31
|||| |||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattcaca 31
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggc 132
||||||||||||||||||| ||||
Sbjct: 116 gaatcttgatgatgctgcaacggc 139
>40702_mtr-MIR172:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tggagcatcatcaagattcacaag 33
||||||||||||| ||||||||||
Sbjct: 6 tggagcatcatcaggattcacaag 29
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctgcagcggc 132
||||||||||||||||||| ||||
Sbjct: 79 gaatcttgatgatgctgcatcggc 102
