miRNEST 2.0, an integrative microRNA resource :: BLAST
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 81.8 bits (41), Expect = 2e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 gctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgca 70
||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 17 gctccttttagtccaataaggagggctgagaagcggctagagctgccatctcatgca 73
Score = 52.0 bits (26), Expect = 2e-07
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 158 tgggagcaactcct-ccgcacgctttgcccactcattggactgaagggagctcc 210
|||||||||||||| ||||| |||||| | | |||||||||||||||||||||
Sbjct: 130 tgggagcaactccttccgcatgctttgttcgcccattggactgaagggagctcc 183
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 73.8 bits (37), Expect = 5e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 14 gctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgca 70
|||||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 15 gctccttttagtccaatacggagggctgagaagcggctagagctgccatctcatgca 71
Score = 60.0 bits (30), Expect = 8e-10
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 158 tgggagcaactcct-ccgcacgctttgcccactcattggactgaagggagctcc 210
|||||||||||||| ||||| ||||||| | | |||||||||||||||||||||
Sbjct: 129 tgggagcaactccttccgcatgctttgctcgcccattggactgaagggagctcc 182
>40370_rco-MIR319d:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 gagctccttttagtccaataaagagggctgaggggcggcca-gagctgccatctcatgca 70
|||||||||| ||||||||| ||||||| || ||||| | ||||||||||||||||||
Sbjct: 7 gagctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgca 66
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 184 cccactcattggactgaagggagctcc 210
||||| |||||||||||||||||||||
Sbjct: 154 cccacccattggactgaagggagctcc 180
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 tcattggactgaagggagctccc 211
|||||||||||||||||||||||
Sbjct: 154 tcattggactgaagggagctccc 176
>41282_ctr-MIR319:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccca 212
|||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctccca 177
>40069_ath-MIR319a:mirbase
Length = 176
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 191 attggactgaagggagctccc 211
|||||||||||||||||||||
Sbjct: 153 attggactgaagggagctccc 173
>39858_aly-MIR319a:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 191 attggactgaagggagctccc 211
|||||||||||||||||||||
Sbjct: 176 attggactgaagggagctccc 196
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccca 212
|||||||||||||||||||||
Sbjct: 148 ttggactgaagggagctccca 168
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccca 212
|||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccca 175
>42642_tae-MIR319:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 184 ttggactgaagggagctccc 203
>41770_bdi-MIR319:mirbase
Length = 280
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 226 ttggactgaagggagctccc 245
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccc 181
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 151 ttggactgaagggagctccc 170
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccc 182
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctccc 184
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 168 ttggactgaagggagctccc 187
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccc 179
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccc 174
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 156 ttggactgaagggagctccc 175
>40703_mtr-MIR319:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccc 188
>40465_gma-MIR319b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctccc 189
>40464_gma-MIR319a:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccc 188
>40369_rco-MIR319c:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccc 182
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccc 173
>40367_rco-MIR319a:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccc 205
>40070_ath-MIR319b:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 152 ttggactgaagggagctccc 171
>39859_aly-MIR319b:mirbase
Length = 246
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 191 ttggactgaagggagctccc 210
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccc 205
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 ttggactgaagggagctccc 211
||||||||||||||||||||
Sbjct: 146 ttggactgaagggagctccc 165