miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41411_ptc-MIR319h:mirbase
          Length = 195

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                   
Query: 14 gctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgca 70
          ||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||
Sbjct: 17 gctccttttagtccaataaggagggctgagaagcggctagagctgccatctcatgca 73



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                 
Query: 158 tgggagcaactcct-ccgcacgctttgcccactcattggactgaagggagctcc 210
           |||||||||||||| ||||| ||||||  | | |||||||||||||||||||||
Sbjct: 130 tgggagcaactccttccgcatgctttgttcgcccattggactgaagggagctcc 183




>41408_ptc-MIR319e:mirbase
          Length = 192

 Score = 73.8 bits (37), Expect = 5e-14
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                   
Query: 14 gctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgca 70
          ||||||||||||||||||  ||||||||||  ||||| |||||||||||||||||||
Sbjct: 15 gctccttttagtccaatacggagggctgagaagcggctagagctgccatctcatgca 71



 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                 
Query: 158 tgggagcaactcct-ccgcacgctttgcccactcattggactgaagggagctcc 210
           |||||||||||||| ||||| ||||||| | | |||||||||||||||||||||
Sbjct: 129 tgggagcaactccttccgcatgctttgctcgcccattggactgaagggagctcc 182




>40370_rco-MIR319d:mirbase
          Length = 187

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                      
Query: 12 gagctccttttagtccaataaagagggctgaggggcggcca-gagctgccatctcatgca 70
          |||||||||| |||||||||  ||||||| ||  ||||| | ||||||||||||||||||
Sbjct: 7  gagctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgca 66



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 cccactcattggactgaagggagctcc 210
           ||||| |||||||||||||||||||||
Sbjct: 154 cccacccattggactgaagggagctcc 180




>41405_ptc-MIR319b:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 189 tcattggactgaagggagctccc 211
           |||||||||||||||||||||||
Sbjct: 154 tcattggactgaagggagctccc 176




>41282_ctr-MIR319:mirbase
          Length = 186

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 ttggactgaagggagctccca 212
           |||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctccca 177




>40069_ath-MIR319a:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 191 attggactgaagggagctccc 211
           |||||||||||||||||||||
Sbjct: 153 attggactgaagggagctccc 173




>39858_aly-MIR319a:mirbase
          Length = 221

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 191 attggactgaagggagctccc 211
           |||||||||||||||||||||
Sbjct: 176 attggactgaagggagctccc 196




>39484_ppt-MIR319e:mirbase
          Length = 174

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 ttggactgaagggagctccca 212
           |||||||||||||||||||||
Sbjct: 148 ttggactgaagggagctccca 168




>39482_ppt-MIR319c:mirbase
          Length = 189

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 ttggactgaagggagctccca 212
           |||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccca 175




>42642_tae-MIR319:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 184 ttggactgaagggagctccc 203




>41770_bdi-MIR319:mirbase
          Length = 280

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 226 ttggactgaagggagctccc 245




>41638_vvi-MIR319f:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccc 181




>41636_vvi-MIR319c:mirbase
          Length = 182

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 151 ttggactgaagggagctccc 170




>41635_vvi-MIR319b:mirbase
          Length = 194

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccc 182




>41407_ptc-MIR319d:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctccc 184




>41406_ptc-MIR319c:mirbase
          Length = 196

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 168 ttggactgaagggagctccc 187




>41404_ptc-MIR319a:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccc 179




>41185_aqc-MIR319:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccc 174




>40704_mtr-MIR319b:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 156 ttggactgaagggagctccc 175




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccc 188




>40465_gma-MIR319b:mirbase
          Length = 208

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctccc 189




>40464_gma-MIR319a:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccc 188




>40369_rco-MIR319c:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccc 182




>40368_rco-MIR319b:mirbase
          Length = 179

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccc 173




>40367_rco-MIR319a:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccc 205




>40070_ath-MIR319b:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 152 ttggactgaagggagctccc 171




>39859_aly-MIR319b:mirbase
          Length = 246

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 191 ttggactgaagggagctccc 210




>39740_smo-MIR319:mirbase
          Length = 215

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccc 205




>39483_ppt-MIR319d:mirbase
          Length = 170

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ttggactgaagggagctccc 211
           ||||||||||||||||||||
Sbjct: 146 ttggactgaagggagctccc 165